Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2 116 9e-21 seq4 89.7 1e-12 >seq2 Length=2390349 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||| | ||||| || |||||||| |||| || ||| Sbjct 2169595 ACTGGTAAGACTATCACTCTTGAAGTTGAGTCCTCTGACACTATCGACAACGTTAAGTCC 2169536 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| ||| || ||| |||||| | |||||||| || ||| Sbjct 2169535 AAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTCGCTGGTAAG 2169476 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || ||| | | || |||||| |||| || || || ||||||||| Sbjct 2169475 CAATTGGAAGATGGCAGAACTCTTTCTGACTACAACATCCAAAAGGAATCCACTCTTCAC 2169416 Query 206374 CTTGTTTTGAGA 206385 | ||||||||| Sbjct 2169415 TTGGTTTTGAGA 2169404 >seq4 Length=2182181 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| || || || || |||||||| || || ||||| | || || ||| Sbjct 2128982 ACAGGTAAGACCATTACCTTGGAAGTCGAGTCCTCCGACACCATTGACAATGTCAAGTCC 2128923 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || ||||| ||| || ||| |||||| | |||||||| || ||| Sbjct 2128922 AAGATCCAGGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTCGCTGGTAAG 2128863 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||||||||||| || || || | | || |||||| ||||||| ||||| || | ||| Sbjct 2128862 CAGTTGGAAGACGGTAGAACCCTTTCTGACTACAACATCCAGAAGGAGTCCACCTTGCAC 2128803 Query 206374 CTTGTTTTGAGA 206385 | || || ||| Sbjct 2128802 TTGGTCTTAAGA 2128791 Score = 87.8 bits (96), Expect = 4e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 173106 GGCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTG 173165 ||| |||||||| | ||||| || |||| || | ||||| |||| || || Sbjct 350668 GGCATCCTTGTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCTTCCAAGATAGCGTA 350609 Query 173166 CCAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATA 173225 ||| | | ||| || || || || |||| ||||||||||| | ||||| | || || Sbjct 350608 CCACAACTTTTGAGCCTTGACAGTGTTTCTACCTCTTCCTTCTCTCTCGTAACGTTCGTA 350549 Query 173226 GAGGTCTTCGAAATCCTTCCCGTAAATTTC-GTCAAGACCGGGAGCTTCCTTCGGACAAA 173284 | || ||||| || | ||||||| ||| | |||| || |||||||| || ||| | | Sbjct 350548 TAACTCCTCGAATTCGTCACCGTAAACTTCTGGCAAG-CCTGGAGCTTCGTTTGGAGAGA 350490 Query 173285 AGAGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAA 173324 | ||| |||||| || | ||||| ||||||||||| Sbjct 350489 AAAGAGTCCAATCACCGTTTTGTTCGACTCTCTTCATGAA 350450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820603152973