Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 >seq2 Length=2390349 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || |||||||| || || | ||||| | |||||||| || Sbjct 2170600 ATGCAAATCTTCGTTAAGACATTAACAGGTAAGACTATCACTCTTGAAGTCGAGTCCTCT 2170541 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || || || || || || || ||||| || || || || Sbjct 2170540 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 2170481 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||| | |||| || || || ||| | ||||| | ||||| | | || ||||| Sbjct 2170480 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 2170421 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||||||||||||||| |||| || || |||||||||||||| || Sbjct 2170420 ATTCAAAAAGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 2170374 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || || || || || | || || | |||||||| | | Sbjct 2170372 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTCGAGTCTTCC 2170313 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || |||||||| | || || || || || || || ||||| || || || || Sbjct 2170312 GACACTATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 2170253 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||| | |||| || || || ||| | ||||| | ||||| | | || ||||| Sbjct 2170252 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 2170193 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || ||||| |||||||| |||| || || |||||||||||||| || Sbjct 2170192 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 2170146 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || || || || || | ||||| | ||||| || || Sbjct 2169619 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATCACTCTTGAAGTTGAGTCCTCT 2169560 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || |||||||| | || || || || || || || ||||| || || || || Sbjct 2169559 GACACTATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 2169500 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||| | || | || || || ||| | ||||||| |||| | | || ||||| Sbjct 2169499 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTCTTTCTGACTACAAC 2169440 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || ||||| |||||||| |||| || || || ||||||||||| || Sbjct 2169439 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 2169393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094327672160