Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4 120 3e-22 seq2 118 1e-21 >seq4 Length=2182181 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || || || | ||| | ||||| ||||| || ||||||||||| | Sbjct 2128780 CCACCTCTCAATCTTAAGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGAA 2128839 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || | ||| || || || || ||||| | || || || || || Sbjct 2128840 AGGGTTCTACCGTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGA 2128899 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || || ||||| ||| | |||||||| || || || Sbjct 2128900 ATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACT 2128959 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || | |||||||| ||||| |||||||| || |||||||||||||||||| Sbjct 2128960 TCCAAGGTAATGGTCTTACCTGTTAAAGTCTTGACGAAAATTTGCATTTTG 2129010 >seq2 Length=2390349 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || || || | ||| || |||||||| ||||||||||||||||| | Sbjct 2170374 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAA 2170433 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | || || || || |||||||| | || || || || || Sbjct 2170434 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGA 2170493 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || || ||||| ||| | ||||| || || || || Sbjct 2170494 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCGACT 2170553 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || ||||| || || ||||| ||||| || |||||||| ||||||||| Sbjct 2170554 TCAAGAGTGATAGTCTTACCTGTTAATGTCTTAACGAAGATTTGCATT 2170601 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || || || | ||| || |||||||||||||| ||||||||||| | Sbjct 2170146 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 2170205 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | || || || || |||||||| | || || || || || Sbjct 2170206 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGA 2170265 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || || || || ||| | |||||||| || || || Sbjct 2170266 ATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGACTCGACT 2170325 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | |||||||| ||||| || ||||| || |||||||||||||| Sbjct 2170326 TCCAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2170372 Score = 113 bits (124), Expect = 5e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 134502 AACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCG 134561 || || | ||| || |||||||| ||||||||||||||||| | || | ||| Sbjct 2169933 AAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTACCGTCT 2169992 Query 134562 TCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCT 134621 || | || || || || || || |||||||| || || || || || ||||| || ||| Sbjct 2169993 TCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCAGGTGGAATACCTTCCTTGTCT 2170052 Query 134622 TGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTT 134681 || || || || || ||| | ||||| || || || || ||||| || ||||| Sbjct 2170053 TGGATCTTAGACTTAACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTGATGGTC 2170112 Query 134682 TTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || |||||||||||||| Sbjct 2170113 TTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2170144 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || ||| || | ||| || |||||||||||||| ||||||||||| | Sbjct 2169393 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAA 2169452 Query 134547 ACGGTG-TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || || | || || | || || || || || ||||| | || || || || || Sbjct 2169453 AGAGTTCTGCCA-TCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGG 2169511 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| || || || || ||| | ||||| || || || || Sbjct 2169512 AATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCAGAGGACTCAAC 2169571 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || ||||| || ||||| || |||||||||||||| Sbjct 2169572 TTCAAGAGTGATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2169619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398317872760