Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4 176 6e-39 seq6 82.4 9e-11 >seq4 Length=2182181 Score = 176 bits (194), Expect = 6e-39 Identities = 893/1407 (63%), Gaps = 41/1407 (3%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| || | ||||||||||| || || || ||||||||||||||||||| || || Sbjct 351321 TAGATGTTAGAGGTGTATGGCTCGAAACATTCGTTGTTACCCAAGATTTGGGAGGTAGAA 351262 Query 118242 GCTGTGGGCATGGGTGCCA-TGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGT 118298 || || ||||| || || | | | |||| ||| | | ||| | || || | | | Sbjct 351261 GCAGTTGGCATTGGAGCAACTAATAAGGA-GTTTCTCAAACCGTGCTTGGCCAACTT--T 351205 Query 118299 TCCTTGAGAGCGTCCCAGTCGTAGT--TGAGCTTTGTCTCCCCCTGCCACATATCAAACT 118356 | ||| | || ||||| || | | || ||| || | || ||||| ||||| | Sbjct 351204 TGCTTCAAGGCATCCCAATCCCACAACTCAG--TTGGCTTTCTCTCCCACAAGTCAAATT 351147 Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416 | | | ||||| || ||||| || ||||| | | || || || || || | | Sbjct 351146 GCAACAAGCCTTGAGATGCTGGAGAACCCTCGTAAGATTCGTAAGGACCTTCTTCAGAAG 351087 Query 118417 CCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCAT 118473 | || || ||| || |||| ||| |||| || || || || ||||| || || Sbjct 351086 CTAACTCAATAGAG---GCTTCGACGGCACCGTGGTAGATAGTCTCGAAAATTTGAATAT 351030 Query 118474 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGA 118533 | | | | | || || | || || || | | || | || || ||| || | Sbjct 351029 TTAATTCTCTAGCTTCTTGAGAGTCGAATGGTAATCTCAATGCCATGAAAGTATCAGCCA 350970 Query 118534 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA 118593 |||||| ||||| | | ||||||| | || ||| | ||||| || || ||| | Sbjct 350969 AACCTTGAACACCCAAGGCAATTGGTCTATTTCTTTTGTTAGATCTCTCGGCT-TCTGGA 350911 Query 118594 -CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 118652 | || || | || || ||||| | | | || | || ||||||| ||| |||| | Sbjct 350910 ACTGGGTAGTAGTTTCTGTCGATGATCTTGTTCAAGTTACGGGTGACAGACTTAGTGACT 350851 Query 118653 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAG-----GAA 118707 || || | ||| ||| | | | | || || |||| | | || || || Sbjct 350850 TCGTGCAACTTCTCGAAGTTGTACCACAAAGACTTGTCAT---CCTTCTCAGCGAAAGAT 350794 Query 118708 GG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || ||||| || |||| ||||| |||| || || | | |||||| | Sbjct 350793 GGCAAAGCGATCGAGGCCAAGTTACAGACAGCAACTTCTTCTGGAGAGGAGTACTCAACG 350734 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || |||||||| ||| ||| || | |||||||||||||| || | ||| || Sbjct 350733 ATCTCACAACACAAGTTAGAAGACTTGATTATACCCAAGTTCTTTTGGTTGGTCTTCTTG 350674 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 ||||| ||||||||||| | |||| | || || || || || || || | | | ||| Sbjct 350673 TTACAGGCATCCTTGTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCTTCCAAGATA 350614 Query 118884 GCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTT 118943 || | ||| | | ||| |||||| | ||| || ||| |||||| | Sbjct 350613 GCGTACCACAACTTTTGAGCCTTGACAGTGTTTCTACCTCTTCCTTCTCTCTCGTAACGT 350554 Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 119003 ||| | | || || || ||||| | |||| | ||||| || | | ||| Sbjct 350553 TCGTATAACTCCTCGAATTCGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTTTGGA 350494 Query 119004 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063 |||| |||| ||| | ||| | || || | ||||||||| | ||||| ||||| Sbjct 350493 GAGAAAAGAGTCCAATCACCGTTTTGTTCGACTCTCTTCATGAACAAATCTGGAATCCAC 350434 Query 119064 AGCGCCGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 119122 | || | ||| | || | | | || |||||| | || ||||| | | || Sbjct 350433 AAAGCTGGGAACAAGTCTCTGGCTCTGAT-TTCTTCCTTACCGTGATTCTTTCTGATGTC 350375 Query 119123 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 119182 | ||||| | ||| || |||||||| || |||| ||||| || | | | ||| | Sbjct 350374 AATGAAGTCGAAGATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAG-CACCTG--G 350318 Query 119183 ACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGG 119236 ||| |||| | |||| || || || |||||| ||| || ||||||| |||||| Sbjct 350317 ACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAACCATTGG 350258 Query 119237 AATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC 119296 ||| ||||| | || ||||| || || ||| || | ||| | || | Sbjct 350257 AATAATACCGTTCGAGGTACCATTAGTACCAGCAATGTAAGCACCAGTGGAACGGATGTT 350198 Query 119297 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 119356 ||| ||||||| ||||||||| || || | ||| || || || || | | | | Sbjct 350197 GTGAATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAGGT 350138 Query 119357 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 119416 |||| || ||||| || ||||| |||| | |||| ||||| || |||||||| Sbjct 350137 ATCGTAAATACCATCAATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGAAGACATTTG 350078 Query 119417 AGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGA 119476 || || |||||||||||||| | |||||| | ||||| |||| | || ||| || Sbjct 350077 TGGAGATGGGGTACCAGCGTTGAACAAAGTTGGAGAACCGTGGGTGAAGAAACGTTGAGA 350018 Query 119477 CATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGAC 119536 |||| || || | || | ||| |||||| || ||||||||||| || || || Sbjct 350017 CATCAAGTTATAAGATTCAATGACCTTCTCAATGTCGTCACCGTGAATACCAATAGAAAC 349958 Query 119537 CCGCATAAACATGTATTGGGGTGTTTC 119563 | ||| | || | ||| ||| |||| Sbjct 349957 TCTCATGATCAAATGTTGTGGTCTTTC 349931 >seq6 Length=1594198 Score = 82.4 bits (90), Expect = 9e-11 Identities = 141/203 (69%), Gaps = 9/203 (4%) Strand=Plus/Plus Query 14150 TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCA 14209 || || |||||||| || ||| | ||| || | || ||| || |||||||| ||| Sbjct 87989 TCGAAACCATCCATTTCGACCAATAATTGGTTCAAAGTAGTTTCACGCTCATCATTAGCA 88048 Query 14210 -----GGCAT-ACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAA 14263 ||||| ||| || || |||| ||||| | ||| ||||| ||||| | ||| Sbjct 88049 CCACTGGCATTACCCTTCGAAC---GTTGTTTACCAATGGCATCAATCTCATCAACAAAA 88105 Query 14264 ACGATACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCG 14323 || ||| | || |||||||||||| | ||| | || |||||||| ||||| Sbjct 88106 ACAATAGAAGGAGCATTTTCACGGGCGGTCTTAAACAAGTCACGCACTCTGGATGCACCA 88165 Query 14324 ACACCCACAAACATCTCCACAAA 14346 ||||| |||||||| || ||||| Sbjct 88166 ACACCAACAAACATTTCGACAAA 88188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435099504280