Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 239 5e-58 seq6 84.2 3e-11 >seq4 Length=2182181 Score = 239 bits (264), Expect = 5e-58 Identities = 1124/1757 (64%), Gaps = 61/1757 (3%) Strand=Plus/Plus Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275 |||| ||||| | || ||||| | || | || |||||||| || || |||||||| Sbjct 349931 GAAAGACCACAACATTTGATCATGAGAGTTTCTATTGGTATTCACGGTGACGACATTGAG 349990 Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 104335 ||| | || | || || |||||| ||| || | |||| |||| | ||||| Sbjct 349991 AAGGTCATTGAATCTTATAACTTGATGTCTCAACGTTTCTTCACCCACGGTTCTCCAACT 350050 Query 104336 CTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAG 104395 | ||||| |||||||| ||| || |||||||| ||| |||||| |||||| ||| Sbjct 350051 TTGTTCAACGCTGGTACCCCATCTCCACAAATGTCTTCTTGTTTCCTTGTCGCCATGAAG 350110 Query 104396 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 104455 || ||||| || | ||||| || | || | | | ||||| || || ||| | Sbjct 350111 GACGACTCTATTGATGGTATTTACGATACCTTGAAGACCTGTGCCTTGATTTCCAAGAGT 350170 Query 104456 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 ||||| |||||||| ||||||| || | | | ||| | || ||| || Sbjct 350171 GCTGGTGGTATTGGTTTGCACATTCACAACATCCGTTCCACTGGTGCTTACATTGCTGGT 350230 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || |||||| || | ||||||||||||||| |||| || || ||| ||| || | Sbjct 350231 ACTAATGGTACCTCGAACGGTATTATTCCAATGGTTCGTGTCTTCAACAACACTGCTAGA 350290 Query 104576 TATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629 || || | |||| ||| ||||| | || || | || | || | |||||| Sbjct 350291 TACGTTGACCAAGGTGGTAACAAGCGTCCA---GGTGCTTTTGCCTTGTACTTGGAGCCA 350347 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689 |||||||| || ||| | || ||| |||| | | || || ||| | || || Sbjct 350348 TGGCACGCAGACATCTTCGACTTCATTGACATCAGAAAGAATCACGGTAAGGAAGA-AAT 350406 Query 104690 CGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 104748 | | ||| | || | ||| | ||| | |||||||||||| | |||||||||||||| || Sbjct 350407 CAGAGCCAGAGACTTGTTCCCAGCTTTGTGGATTCCAGATTTGTTCATGAAGAGAGTCGA 350466 Query 104749 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGT 104808 | | || ||||| |||| || | |||| || | || || || | | || | Sbjct 350467 ACAAAACGGTGATTGGACTCTTTTCTCTCCAAACGAAGCTCCAGGCTTGCCAGAAGTTTA 350526 Query 104809 GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGAC 104868 ||||| || || || | | ||| | |||||| |||||| | | | | || Sbjct 350527 CGGTGACGAATTCGAGGAGTTATACGAACGTTACGAGAGAGAAGGAAGAGGTA--GAAAC 350584 Query 104869 GGTGCCA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 || || ||| | ||||| | ||||| | | |||| || || || ||||| Sbjct 350585 ACTGTCAAGGCTCAAAAGTTGTGGTACGCTATCTTGGAAGCTCAGACTGAAACCGGTACT 350644 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || | |||| | ||||| || ||||||||| | |||| || |||||||| |||||| | Sbjct 350645 CCTTTCATGTTGTACAAGGATGCCTGTAACAAGAAGACCAACCAAAAGAACTTGGGTATA 350704 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046 |||||| ||| || | ||| || ||| | || | | ||| || ||| Sbjct 350705 ATCAAGTCTTCTAACTTGTGTTGTGAGATCGTTGAGTACTCCTCTCCAGAAGAAGTTGCT 350764 Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATT 105105 || |||||| | || || |||||| | || | | || || ||| ||| | || Sbjct 350765 GTCTGTAACTTGGCCTCGATCGCTTTGCCATCTTTCGCTGAGAAGGATGAC-AAGTCTTT 350823 Query 105106 -TG-----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAG 105159 || | | || || | |||||||| || || |||||||| ||| | |||| Sbjct 350824 GTGGTACAACTTCGAGAAGTTGCACGAAGTCACTAAGTCTGTCACCCGTAACTTGAACAA 350883 Query 105160 AGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACC 105218 | || || ||||| | ||||| ||| ||| || | |||||| | ||| | Sbjct 350884 GATCATCGACAGAAACTACTACCCAGTTCCAGA-AGCCGAGAGATCTAACAAAAGAAATA 350942 Query 105219 GTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCA 105277 | ||||||| | |||||||| ||| | || ||| ||||| | ||| || || Sbjct 350943 GACCAATTGCCTTGGGTGTTCAAGGTTTGGCTGATACTTTCATGGCATTGAGATTAC-CA 351001 Query 105278 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCC 105337 || || || | ||||| | ||| | ||| | || || ||||| || || |||| Sbjct 351002 TTCGACTCTCAAGAAGCTAGAGAATTAAATATTCAAATTTTCGAGACTATCTACCACGGT 351061 Query 105338 GCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGT 105397 || | || || | ||||| || | || ||||| || ||| | | |||||| Sbjct 351062 GCCGTCGAAGCCTCTATTGAGTTAGCTTCTGAAGAAGGTCCTTACGAATCTTACGAGGGT 351121 Query 105398 TCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TC 105455 |||||||| || ||||| || | |||||||| ||||||| | || | | | || Sbjct 351122 TCTCCAGCATCTCAAGGCTTGTTGCAATTTGACTTGTGGGA--GAGAAAGCCAACTGAGT 351179 Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 | || ||||| || | ||| || | || | ||| | | || |||| Sbjct 351180 TGTGGGATTGGGATGCCTTGAAGCAAAAGTTGGCCAAGCACGGTTTGAGAAA----CTCC 351235 Query 105516 TCA----TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 105571 | | | |||||||||||||| || || ||| | |||||||||||||| || ||||| Sbjct 351236 TTATTAGTTGCTCCAATGCCAACTGCTTCTACCTCCCAAATCTTGGGTAACAACGAATGT 351295 Query 105572 TTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATT 105631 || || || ||||| | |||||||| |||||| | || || || || ||| Sbjct 351296 TTCGAGCCATACACCTCTAACATCTACTCAAGAAGAGTGTTGGCTGGTGAATTCCAAATT 351355 Query 105632 GTCAACAAGCAT-CTCG-TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGAT---A 105686 |||||| ||| || | || |||| | || | ||| ||||| || ||| | Sbjct 351356 GTCAAC--CCATACTTGTTGCGTGACTTGGTTGACTTGGGTATCTGG---AACGATTCCA 351410 Query 105687 TGAAG---GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTG-TGGATATTCCA 105742 ||||| || |||| || |||||| | || | |||| | |||||| Sbjct 351411 TGAAGAACAATATCATTTCTAA---CAATGGTTCTA-TCCAGTCATTGCCTAACATTCCA 351466 Query 105743 AATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGAC 105802 | || | ||| || ||| || |||||||| ||| ||| || |||||||| Sbjct 351467 GACGAGCTCAAGGCCTTATACAAGACCGTTTGGGAGATCTCACAAAAGCATATCATTGAC 351526 Query 105803 ATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGG 105860 ||||| || || | | ||||||||||||| ||| ||| |||| || ||| Sbjct 351527 ATGGCTGCTGACAGAGCCGCCTTCATTGATCAA--TCACAGTCATTGAACATCCACATCA 351584 Query 105861 AAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCA 105920 | ||||| ||| ||||| | |||||||| | ||| |||||||||||||| | | Sbjct 351585 AGGACCCAACAATGGGTAAGCTTACCTCTATGCATTTCTACGGTTGGAAGAAGGGTTTGA 351644 Query 105921 AAACGGGGATGTATTAC 105937 | || || ||||| ||| Sbjct 351645 AGACTGGTATGTACTAC 351661 >seq6 Length=1594198 Score = 84.2 bits (92), Expect = 3e-11 Identities = 218/326 (67%), Gaps = 15/326 (5%) Strand=Plus/Plus Query 9611 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGC- 9669 || ||||||||||| || ||| | |||||| | ||| ||| || |||||||| || Sbjct 87989 TCGAAACCATCCATTTCGACCAATAATTGGTTCAAAGTAGTTTCACGCTCATCATTAGCA 88048 Query 9670 ----TGGCAT-ACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAG 9724 |||||| ||| | || |||| || || | ||||||||||||||||| || Sbjct 88049 CCACTGGCATTACCCTTCGAAC---GTTGTTTACCAATGGCATCAATCTCATCAACAAAA 88105 Query 9725 ACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTG--GCGC 9782 || || | || |||||| || ||| | ||| | || || ||| || | || | Sbjct 88106 ACAATAGAAGGAGCATTTTCACGGGCGGTCTTAAACAAGTCACG--CACTCTGGATGCAC 88163 Query 9783 CCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGATGAAGGGGACATTA 9841 | |||||||||||||| || ||||| | || | || ||| | | ||||| ||| Sbjct 88164 CAACACCAACAAACATTTCGACAAACTCTGATCCAGACACAGAGTA-AAAGGGTACACCC 88222 Query 9842 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 9901 | || || || | |||| || | | ||||||||| |||||||| || | | Sbjct 88223 GCCTCTCCGGCGGTTGCTCTTGCAATTAAAGTCTTACCAGTACCTGGGGGTCCAGACAAA 88282 Query 9902 AGGGCACCTCGTGGAATCTTGGCGCC 9927 | ||||||| ||| ||||| || || Sbjct 88283 ATTGCACCTCTTGGGATCTTTGCTCC 88308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260705220120