Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq4 122 1e-22 >seq4 Length=2182181 Score = 122 bits (134), Expect = 1e-22 Identities = 352/531 (66%), Gaps = 12/531 (2%) Strand=Plus/Plus Query 19193 TTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAAC-CCGCAGATGTC 19251 |||||||| |||| | || || | |||||||| ||||| || | || || ||||| Sbjct 350027 TTCTTCACCCACGGTTCTCCAACTTTGTTCAACGCTGGTACCC-CATCTCCACAAATGTC 350085 Query 19252 GAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAA 19311 |||||||| || || |||||||| ||| ||||| || || ||||| || | || Sbjct 350086 TTCTTGTTTCCTTGTCGCCATGAAGGACGACTCTATTGATGGTATTTACGATACCTTGAA 350145 Query 19312 GGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC-TGCTCGAATATCC 19370 | || || || |||||| | | || ||||| || | ||| | | | || |||| Sbjct 350146 GACCTGTGCCTTGATTTCCAAGAGTGCTGGTGGTATTGGTTTGCACATTCAC-AACATCC 350204 Query 19371 GGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGC-CGA-CGGTATCGTCCCAAT 19428 | || | |||| | || ||| || || || || | ||| |||||| | ||||| Sbjct 350205 GTTCCACTGGTGCTTACATTGCTGGTACTAATGG--TACCTCGAACGGTATTATTCCAAT 350262 Query 19429 GCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACG--CAAG 19486 | | || |||||||||||||| || || ||||| |||| || || ||| || || | Sbjct 350263 GGTTCGTGTCTTCAACAACACTGCTAGATACGTTGACCAAGGTGGTAACAAGCGTCCAGG 350322 Query 19487 GGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTG 19546 ||| || ||| | ||| | |||||||||||||| ||| || | || ||| | || | Sbjct 350323 TGCT--TTTGCCTTGTACTTGGAGCCATGGCACGCAGACATCTTCGACTTCATTGACATC 350380 Query 19547 CGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATT 19606 | ||| || ||| | || || || | | ||| | ||| | || ||||||||| Sbjct 350381 AGAAAGAATCACGGTAAGGAAGAAATCAGAGCCAGAGACTTGTTCCCAGCTTTGTGGATT 350440 Query 19607 CCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCAC 19666 || || | |||||| ||| || || | ||| || ||| || | | || || Sbjct 350441 CCAGATTTGTTCATGAAGAGAGTCGAACAAAACGGTGATTGGACTCTTTTCTCTCCAAAC 350500 Query 19667 GAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTAC 19717 ||| || ||| | || || || ||||| || | ||| | ||||| ||| Sbjct 350501 GAAGCTCCAGGCTTGCCAGAAGTTTACGGTGACGAATTCGAGGAGTTATAC 350551 Score = 111 bits (122), Expect = 2e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 |||| ||| |||||||| || ||||| | |||||||||||| ||||| | |||||| Sbjct 351669 GTTCTCAAGTAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAG 351610 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | ||||| ||| | |||| || ||| |||||| | ||||| || || || ||| Sbjct 351609 GTAAGCTTACCCATTGTTGGGTCCTTGATGTGGATGTTCAATGACTGTGATTGATCAATG 351550 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369 | || | | ||| || |||||||| |||| |||||| | |||||||| | |||| Sbjct 351549 AAGGCGGCTCTGTCAGCAGCCATGTCAATGATATGCTTTTGTGAGATCTCCCAAACGGTC 351490 Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGA 78397 ||| | |||||| ||||| | ||||| Sbjct 351489 TTGTATAAGGCCTTGAGCTCGT-CTGGA 351463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524710864720