Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq4 140 4e-28
>seq4
Length=2182181
Score = 140 bits (154), Expect = 4e-28
Identities = 501/768 (65%), Gaps = 18/768 (2%)
Strand=Plus/Plus
Query 53210 GGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAG 53269
||||| |||||||||||| | ||| ||| | || |||| ||| |||
Sbjct 349967 GGTATTCACGGTGACGACATTGAGAAGGTCATTGAATCTTATAACTTGATGTCTCAACGT 350026
Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA-ATCACCCTCAGATGTC 53328
| ||| || |||| | ||||| |||||||||||||||| ||| || || |||||
Sbjct 350027 TTCTTCACCCACGGTTCTCCAACTTTGTTCAACGCTGGTACCCCATCTCCA-CAAATGTC 350085
Query 53329 GAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAA 53388
|| ||||| || || |||||||| ||||| || || || || ||||| || | ||
Sbjct 350086 TTCTTGTTTCCTTGTCGCCATGAAGGACGACTCTATTGATGGTATTTACGATACCTTGAA 350145
Query 53389 GGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCC 53447
| |||||| || |||||| | | |||||||| ||| | ||| | | | ||| |||
Sbjct 350146 GACCTGTGCCTTGATTTCCAAGAGTGCTGGTGGTATTGGTTTGCACATTCAC-AACATCC 350204
Query 53448 GTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGC 53507
|| | | || | || || || || || | | | || || | || |||
Sbjct 350205 GTTCCACTGGTGCTTACATTGCTGGTACTAATGGTACCTCGAACGGTATTATTCCAATGG 350264
Query 53508 TCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGGGG 53566
| || |||||||||||||| || | ||||| |||| |||||| ||||| | ||| |
Sbjct 350265 TTCGTGTCTTCAACAACACTGCTAGATACGTTGACCAAGGTGGTAACAAGCGTCCAGGTG 350324
Query 53567 TCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGT 53626
| || ||| | ||| | ||||| |||||||| ||||| | || || | || | |
Sbjct 350325 -CTTTTGCCTTGTACTTGGAGCCATGGCACGCAGACATCTTCGACTTCATTGACATCAGA 350383
Query 53627 CTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCG 53686
|||||| ||| | ||||| || | | | ||| |||| ||||| ||||||||||
Sbjct 350384 AAGAATCACGGTAAGGAAGAAATCAGAGCCAGAGACTTGTTCCCAGCTTTGTGGATTCCA 350443
Query 53687 GACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAG 53746
|| | |||||| | | || || | ||| || ||| || | | || |||||
Sbjct 350444 GATTTGTTCATGAAGAGAGTCGAACAAAACGGTGATTGGACTCTTTTCTCTCCAAACGAA 350503
Query 53747 TGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACG-TACGC 53805
|| ||| | | | || |||||||| || || | ||| | || || ||| ||||
Sbjct 350504 GCTCCAGGCTTGCCAGAAGTTTACGGTGACGAATTCGAGGAGTTATA-CGAACGTTACG- 350561
Query 53806 AGTTCAGGGCCGCTACAAGAAGAA----GGTCAAGGCGCGTGAGGTATGGGATGCAATCC 53861
|| || | | | | | |||| |||||||| | || | ||| | || |||
Sbjct 350562 AG---AGAGAAGGAAGAGGTAGAAACACTGTCAAGGCTCAAAAGTTGTGGTACGCTATCT 350618
Query 53862 TCAAGAGC-CAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAG 53920
| | ||| ||| || || || || || | ||||| ||||||||| | ||| ||
Sbjct 350619 TGGA-AGCTCAGACTGAAACCGGTACTCCTTTCATGTTGTACAAGGATGCCTGTAACAAG 350677
Query 53921 AAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGCAACTTATGT 53968
|||| |||||| |||||| | || | ||||| || ||||| |||
Sbjct 350678 AAGACCAACCAAAAGAACTTGGGTATAATCAAGTCTTCTAACTTGTGT 350725
Score = 118 bits (130), Expect = 1e-21
Identities = 281/418 (67%), Gaps = 9/418 (2%)
Strand=Plus/Minus
Query 74763 TGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCA 74822
||| | ||||||||||||| ||||| || || || || | | || ||||| | ||
Sbjct 397933 TGCAAACCTTCATCTCTGCAGATCAACTCGTTAGAGAAAGTCAAACCTGGCATCAAACCT 397874
Query 74823 CGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACAC 74882
| |||||||||||| ||||||| | ||| |||||||||||||| || ||||| ||
Sbjct 397873 CTCTTCTTCAACCAGAAGATGGAAGCGAAAGAACCACTGAAGAAAATACCTTCAACGGCA 397814
Query 74883 GCAAAGGCGACAAGGCGTTGCGCGAAC---GGTGCATCGGAAGTCATCCAAGTCTGAGCC 74939
||||| || || | | || ||||| | |||| || ||||| || ||||
Sbjct 397813 GCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCATCATCAGAGATCCATCTCAAAGCC 397754
Query 74940 CATTCAGCTTTTCGTTTGACCGCAGGGACAG-TATCGATCGCTTGGAAGAGG--CTTGCC 74996
|| ||||| || | ||| ||| ||| | | || || || | ||| ||| | |
Sbjct 397753 CAATCAGCCTTCTTTCTGA-TGCATGGAATGTTGTCAATGGCGTTGAAAAGGAAGTCAGC 397695
Query 74997 TTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATC 75056
||| ||| ||| ||||| ||| ||||||| | | ||||| ||||| || |||||
Sbjct 397694 TTC-CTTAGGG-TCCTTAACGTAAGTGTCAATTAACAAAGAGTAAGTCTCGGAGTGAATG 397637
Query 75057 GACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTT 75116
|| | | ||| | |||||||| || || |||| || || || ||
Sbjct 397636 TTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTGGACTTCGGCA 397577
Query 75117 GAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCA 75174
|| || ||| | | | ||||| ||||||| ||||| ||||||||||| |||||||
Sbjct 397576 GAGAAGTTCTCGACCAAGTTCTCGTTGACGATACCGTCAGAGGCGGCGAAGAAAGCCA 397519
Score = 107 bits (118), Expect = 2e-18
Identities = 143/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 55727 CTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGT 55786
||||||| | ||| ||| || |||||||| |||| ||| | | ||||||||| |
Sbjct 351473 CTCAAGGCCTTATACAAGACCGTTTGGGAGATCTCACAAAAGCATATCATTGACATGGCT 351532
Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846
||||| | | || | ||| || || || ||||| |||||||| ||| || | ||
Sbjct 351533 GCTGACAGAGCCGCCTTCATTGATCAATCACAGTCATTGAACATCCACATCAAGGACCCA 351592
Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906
|| ||| ||| | | ||| ||||| || ||||| ||||||||||| | ||||| |||
Sbjct 351593 ACAATGGGTAAGCTTACCTCTATGCATTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGT 351652
Query 55907 ATGTACTATCTGCGGACCC 55925
|||||||| || | ||||
Sbjct 351653 ATGTACTACTTGAGAACCC 351671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215911077400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |