Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq4 140 4e-28 >seq4 Length=2182181 Score = 140 bits (154), Expect = 4e-28 Identities = 501/768 (65%), Gaps = 18/768 (2%) Strand=Plus/Plus Query 53210 GGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAG 53269 ||||| |||||||||||| | ||| ||| | || |||| ||| ||| Sbjct 349967 GGTATTCACGGTGACGACATTGAGAAGGTCATTGAATCTTATAACTTGATGTCTCAACGT 350026 Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA-ATCACCCTCAGATGTC 53328 | ||| || |||| | ||||| |||||||||||||||| ||| || || ||||| Sbjct 350027 TTCTTCACCCACGGTTCTCCAACTTTGTTCAACGCTGGTACCCCATCTCCA-CAAATGTC 350085 Query 53329 GAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAA 53388 || ||||| || || |||||||| ||||| || || || || ||||| || | || Sbjct 350086 TTCTTGTTTCCTTGTCGCCATGAAGGACGACTCTATTGATGGTATTTACGATACCTTGAA 350145 Query 53389 GGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCC 53447 | |||||| || |||||| | | |||||||| ||| | ||| | | | ||| ||| Sbjct 350146 GACCTGTGCCTTGATTTCCAAGAGTGCTGGTGGTATTGGTTTGCACATTCAC-AACATCC 350204 Query 53448 GTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGC 53507 || | | || | || || || || || | | | || || | || ||| Sbjct 350205 GTTCCACTGGTGCTTACATTGCTGGTACTAATGGTACCTCGAACGGTATTATTCCAATGG 350264 Query 53508 TCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGGGG 53566 | || |||||||||||||| || | ||||| |||| |||||| ||||| | ||| | Sbjct 350265 TTCGTGTCTTCAACAACACTGCTAGATACGTTGACCAAGGTGGTAACAAGCGTCCAGGTG 350324 Query 53567 TCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGT 53626 | || ||| | ||| | ||||| |||||||| ||||| | || || | || | | Sbjct 350325 -CTTTTGCCTTGTACTTGGAGCCATGGCACGCAGACATCTTCGACTTCATTGACATCAGA 350383 Query 53627 CTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCG 53686 |||||| ||| | ||||| || | | | ||| |||| ||||| |||||||||| Sbjct 350384 AAGAATCACGGTAAGGAAGAAATCAGAGCCAGAGACTTGTTCCCAGCTTTGTGGATTCCA 350443 Query 53687 GACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAG 53746 || | |||||| | | || || | ||| || ||| || | | || ||||| Sbjct 350444 GATTTGTTCATGAAGAGAGTCGAACAAAACGGTGATTGGACTCTTTTCTCTCCAAACGAA 350503 Query 53747 TGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACG-TACGC 53805 || ||| | | | || |||||||| || || | ||| | || || ||| |||| Sbjct 350504 GCTCCAGGCTTGCCAGAAGTTTACGGTGACGAATTCGAGGAGTTATA-CGAACGTTACG- 350561 Query 53806 AGTTCAGGGCCGCTACAAGAAGAA----GGTCAAGGCGCGTGAGGTATGGGATGCAATCC 53861 || || | | | | | |||| |||||||| | || | ||| | || ||| Sbjct 350562 AG---AGAGAAGGAAGAGGTAGAAACACTGTCAAGGCTCAAAAGTTGTGGTACGCTATCT 350618 Query 53862 TCAAGAGC-CAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAG 53920 | | ||| ||| || || || || || | ||||| ||||||||| | ||| || Sbjct 350619 TGGA-AGCTCAGACTGAAACCGGTACTCCTTTCATGTTGTACAAGGATGCCTGTAACAAG 350677 Query 53921 AAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGCAACTTATGT 53968 |||| |||||| |||||| | || | ||||| || ||||| ||| Sbjct 350678 AAGACCAACCAAAAGAACTTGGGTATAATCAAGTCTTCTAACTTGTGT 350725 Score = 118 bits (130), Expect = 1e-21 Identities = 281/418 (67%), Gaps = 9/418 (2%) Strand=Plus/Minus Query 74763 TGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCA 74822 ||| | ||||||||||||| ||||| || || || || | | || ||||| | || Sbjct 397933 TGCAAACCTTCATCTCTGCAGATCAACTCGTTAGAGAAAGTCAAACCTGGCATCAAACCT 397874 Query 74823 CGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACAC 74882 | |||||||||||| ||||||| | ||| |||||||||||||| || ||||| || Sbjct 397873 CTCTTCTTCAACCAGAAGATGGAAGCGAAAGAACCACTGAAGAAAATACCTTCAACGGCA 397814 Query 74883 GCAAAGGCGACAAGGCGTTGCGCGAAC---GGTGCATCGGAAGTCATCCAAGTCTGAGCC 74939 ||||| || || | | || ||||| | |||| || ||||| || |||| Sbjct 397813 GCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCATCATCAGAGATCCATCTCAAAGCC 397754 Query 74940 CATTCAGCTTTTCGTTTGACCGCAGGGACAG-TATCGATCGCTTGGAAGAGG--CTTGCC 74996 || ||||| || | ||| ||| ||| | | || || || | ||| ||| | | Sbjct 397753 CAATCAGCCTTCTTTCTGA-TGCATGGAATGTTGTCAATGGCGTTGAAAAGGAAGTCAGC 397695 Query 74997 TTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATC 75056 ||| ||| ||| ||||| ||| ||||||| | | ||||| ||||| || ||||| Sbjct 397694 TTC-CTTAGGG-TCCTTAACGTAAGTGTCAATTAACAAAGAGTAAGTCTCGGAGTGAATG 397637 Query 75057 GACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTT 75116 || | | ||| | |||||||| || || |||| || || || || Sbjct 397636 TTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCTGGGATTTGGACTTCGGCA 397577 Query 75117 GAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCA 75174 || || ||| | | | ||||| ||||||| ||||| ||||||||||| ||||||| Sbjct 397576 GAGAAGTTCTCGACCAAGTTCTCGTTGACGATACCGTCAGAGGCGGCGAAGAAAGCCA 397519 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 55727 CTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGT 55786 ||||||| | ||| ||| || |||||||| |||| ||| | | ||||||||| | Sbjct 351473 CTCAAGGCCTTATACAAGACCGTTTGGGAGATCTCACAAAAGCATATCATTGACATGGCT 351532 Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 ||||| | | || | ||| || || || ||||| |||||||| ||| || | || Sbjct 351533 GCTGACAGAGCCGCCTTCATTGATCAATCACAGTCATTGAACATCCACATCAAGGACCCA 351592 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 || ||| ||| | | ||| ||||| || ||||| ||||||||||| | ||||| ||| Sbjct 351593 ACAATGGGTAAGCTTACCTCTATGCATTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGT 351652 Query 55907 ATGTACTATCTGCGGACCC 55925 |||||||| || | |||| Sbjct 351653 ATGTACTACTTGAGAACCC 351671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215911077400