Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2 136 5e-27 seq4 129 7e-25 >seq2 Length=2390349 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | || || ||||| || || || ||||||||||| | Sbjct 2170144 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACCATCACCCTCGAGGTTGAGTCTTCT 2170085 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| |||| || || |||||||| || ||||| || ||||| Sbjct 2170084 GACACTATCGACAACGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 2170025 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| |||| || |||||||||||| | || || | | | || || | ||||| || Sbjct 2170024 CAGCGTTTAATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTCTCTGACTACAAC 2169965 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | ||||| |||||||||||||| Sbjct 2169964 ATTCAAAAAGAATCCACTCTTCA 2169942 Score = 136 bits (150), Expect = 5e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27399 TACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGA 27458 || || |||||||||||| || ||||| | || || |||||||| |||||||| || || Sbjct 2170607 TAATACAATGCAAATCTTCGTTAAGACATTAACAGGTAAGACTATCACTCTTGAAGTCGA 2170548 Query 27459 GTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCC 27518 ||| ||| | ||||| || | ||| | || || || |||||||| || ||||| || Sbjct 2170547 GTCCTCTGACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACC 2170488 Query 27519 AGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGA 27578 ||||| || | | ||||| |||||||||||| | || || | | | || || | || Sbjct 2170487 TGACCAACAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGA 2170428 Query 27579 CTATAATGTCCAAAAGGAATCCACTCTTCA 27608 ||| || | ||||| |||||||||||||| Sbjct 2170427 CTACAACATTCAAAAAGAATCCACTCTTCA 2170398 Score = 134 bits (148), Expect = 2e-26 Identities = 176/243 (72%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | || || |||||||| |||||||| |||||||| | Sbjct 2169619 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACTATCACTCTTGAAGTTGAGTCCTCT 2169560 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || || |||||||| || ||||| || ||||| Sbjct 2169559 GACACTATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 2169500 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || |||||||||||| | || |||| | || || | ||||| || Sbjct 2169499 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTCTTTCTGACTACAAC 2169440 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAGT 27645 |||||||||||||||||||||| | || ||| | | | ||||| ||| |||| | Sbjct 2169439 ATCCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTCAA---TAAATT 2169383 Query 27646 TTT 27648 ||| Sbjct 2169382 TTT 2169380 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | || || ||||| ||||| | || || ||||| Sbjct 2170372 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTCGAGTCTTCC 2170313 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || || |||||||| || ||||| || ||||| Sbjct 2170312 GACACTATCGACAACGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 2170253 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||| |||||||||||| | || || | | | || || | ||||| || Sbjct 2170252 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTCTTTCTGACTACAAC 2170193 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||||||||||||||||||||| Sbjct 2170192 ATCCAAAAGGAATCCACTCTTCA 2170170 >seq4 Length=2182181 Score = 129 bits (142), Expect = 7e-25 Identities = 644/1018 (63%), Gaps = 21/1018 (2%) Strand=Plus/Minus Query 80725 TCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCC 80784 ||||||| || ||||| || | ||| || || | | | ||||| |||| |||||| Sbjct 350976 TCAGCCAAACCTTGAACACCCAAGGCAATTGGTCTATTTCTTTTGTTAGATCTCTCGGCT 350917 Query 80785 TCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGT 80844 || |||| |||||| |||| | ||||||| ||||| ||| || || ||| | Sbjct 350916 TCTGGAACTGGGTAGTAGTTTCTGTCGATGATCTTGTTCAAGTTACGGGTGACAGACTTA 350857 Query 80845 GTAACATCATGAAGTTTCTGAAAGTCGAAT---------TGGTTCCCCTTCACA---AAT 80892 || || || || | |||| |||| | | | || ||||| || || Sbjct 350856 GTGACTTCGTGCAACTTCTCGAAGTTGTACCACAAAGACTTGTCATCCTTCTCAGCGAAA 350797 Query 80893 GCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTC 80951 | || || || | || |||| || || || || || ||||| | | | |||| Sbjct 350796 GATGGCAAAGCG-ATCGAGGCCAAGTTACAGACAGCAACTTCTTCTGGAGAGGAGTACTC 350738 Query 80952 GACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTT 81011 ||||| || ||||| ||||||||||| ||| |||||| ||| || ||||| | ||| Sbjct 350737 AACGATCTCACAACACAAGTTAGAAGACTTGATTATACCCAAGTTCTTTTGGTTGGTCTT 350678 Query 81012 GGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAG 81071 ||| || || |||||||| ||||| | || |||||||| || ||| | | | Sbjct 350677 CTTGTTACAGGCATCCTTGTACAACATGAAAGGAGTACCGGTTTCAGTCTGAGCTTCCAA 350618 Query 81072 GATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATA 81131 ||| |||| ||| | || | |||||||| || | | | ||||| | | || Sbjct 350617 GATAGCGTACCACAACTTTTGAGCCTTGACAGTGTTTCTACCTCTTCCTTCTCTCTCGTA 350558 Query 81132 CTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTT 81191 |||| || ||||| | | |||||| || ||| | | | |||| ||||| Sbjct 350557 ACGTTCGTATAACTCCTCGAATTCGTCACCGTAAACTTCTGGCAAGCCTGGAGCTTCGTT 350498 Query 81192 AGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGAT 81251 || | | || ||| || || | || || ||||||||| || || || Sbjct 350497 TGGAGAGAAAAGAGTCCAATCACCGTTTTGTTCGACTCTCTTCATGAACAAATCTGGAAT 350438 Query 81252 CCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAA 81311 ||| | || | ||||| ||| | | | || || | ||| || || | | Sbjct 350437 CCACAAAGCTGGGAACAAGTCTCTGGCTCTGATTTCTTCCTTACCGTGATTCTTTCTGAT 350378 Query 81312 CTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTT 81371 || | ||||| | |||||| || ||||||||||||| |||| ||| | | | ||| Sbjct 350377 GTCAATGAAGTCGAAGATGTCTGCGTGCCATGGCTCCAAGTACAAGGCAAAAG-CACCTG 350319 Query 81372 G-CGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAG 81427 | || | ||||| |||| ||||| | ||||| ||| || ||||| | ||| | Sbjct 350318 GACGCTTGTTACCACCTTGGTCAACGTATCTAGCAGTGTTGTTGAAGACACGAACCATTG 350259 Query 81428 GGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCT 81487 | || ||||| | || ||| || ||||| | || | || ||| || | | Sbjct 350258 GAATAATACCGTTCGAGGTACCATTAGTACCAGCAATGTAAGCACCAGTGGAACGGATGT 350199 Query 81488 TGCTGAT-TGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATG 81546 || || || || ||| || ||||| | | ||| |||||| ||||| |||| | Sbjct 350198 TGTGAATGTGCAA-ACCAATACCACCAGCACTCTTGGAAATCAAGGCACAGGTCTTCAAG 350140 Query 81547 GTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATC 81606 || || ||||| || || || || | |||||| | | | |||||| ||||| Sbjct 350139 GTATCGTAAATACCATCAATAGAGTCGTCCTTCATGGCGACAAGGAAACAAGAAGACATT 350080 Query 81607 TGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTT 81666 || || | | || || ||||||| ||||| | |||| |||| |||| | Sbjct 350079 TGTGGAGATGGGGTACCAGCGTTGAACAAAGTTGGAGAACCGTGGGTGAAGAAACGTTGA 350020 Query 81667 GACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAG 81724 ||||||| || ||| | ||| |||| ||| ||||||||||||||||| |||| Sbjct 350019 GACATCAAGTTATAAGATTCAATGACCTTCTCAATGTCGTCACCGTGAATACCAATAG 349962 Score = 109 bits (120), Expect = 6e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || |||||||| | || || ||||| ||||| | || || ||||| Sbjct 2129007 AATGCAAATTTTCGTCAAGACTTTAACAGGTAAGACCATTACCTTGGAAGTCGAGTCCTC 2128948 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| ||| | ||| | || || ||||||||||| || ||||| || ||||| Sbjct 2128947 CGACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATTCCACCTGACCA 2128888 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | || || ||||||||||| | || || | | | ||||| | ||||| || Sbjct 2128887 ACAAAGATTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACCCTTTCTGACTACAA 2128828 Query 27585 TGTCCAAAAGGAATCCAC 27602 |||| ||||| ||||| Sbjct 2128827 CATCCAGAAGGAGTCCAC 2128810 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/205 (71%), Gaps = 6/205 (3%) Strand=Plus/Minus Query 80047 TAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTC 80106 |||||||| || ||||| | ||||||||||| ||||| | |||||||| | ||||| Sbjct 351660 TAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTA 351601 Query 80107 GCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCA 80166 | | ||| |||| || ||| |||||||| ||||| || ||| ||||| || | Sbjct 351600 CCCATTGTTGGGTCCTTGATGTGGATGTTCAATGACTGTGATTGATCAATGAAGGCGGCT 351541 Query 80167 CGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGATACA-- 80224 | || || ||||| ||||| || |||||||| || ||||| || || || | Sbjct 351540 CTGTCAGCAGCCATGTCAATGATATGCTTTTGTGAGATCTCCCAAACGGTCTTGTATAAG 351481 Query 80225 -CCTTACGAAGCTCCTCTGGAATGT 80248 |||| ||||| |||||||||| Sbjct 351480 GCCTT---GAGCTCGTCTGGAATGT 351459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310307324560