Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 8e-16
>seq1
Length=3044122
Score = 98.7 bits (108), Expect = 8e-16
Identities = 209/307 (68%), Gaps = 4/307 (1%)
Strand=Plus/Minus
Query 30059 CTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118
|||||||| ||||| || | | | || || || || | ||||| || ||||||
Sbjct 1793747 CTCACGTAGAACTGGCAGAAGACATGACATGGTGGTAAGGCCATCTTTCCAAAGTCTGGT 1793688
Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30178
|| ||||| ||| ||| ||| || | ||||| | |||||| || | | | | |
Sbjct 1793687 GGATTCCAAGCGGACATGATAATTCTTCTGTCGTATGGGTTTGTCTTTAACTTCTTGATG 1793628
Query 30179 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTACTC 30237
| | ||||| ||| || | || || | |||||||| ||| ||| |||| ||
Sbjct 1793627 ACATCTTGCAACTGGTCAAATCCTTGACCGGTGTAGTCTGTG-TCACAATCCTTGTATTC 1793569
Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT-TCCCTGT 30296
||||||||||| ||||||||||| ||||| || ||||||| || || ||| | | |
Sbjct 1793568 AGCTCCGAAATGTCTCCACTGGAATCCGTAAACTGGTCCCAAATCACCTTCTCTACGTTC 1793509
Query 30297 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30356
| || || ||| ||||||||| || || | || || || | |||||||| || || |
Sbjct 1793508 GGTC-AAACCCAACTTGTCCAAGAACTCACGAGATCCATTTCCTTCCCAGATTTTCACGC 1793450
Query 30357 CCTTCTC 30363
| || ||
Sbjct 1793449 CTTTTTC 1793443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310335625196
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |