Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 7e-11 >seq1 Length=3044122 Score = 82.4 bits (90), Expect = 7e-11 Identities = 165/242 (68%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTT--CC 34379 || ||||| |||||||| | | || ||||| || || |||||||| ||| || || Sbjct 1793449 GGCGTGAAAATCTGGGAAGGAAATGGATCTCGTGAGTTCTTGGACAAGTTGGGTTTGACC 1793508 Query 34380 CATCTCGGGAG-GAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGG 34438 | | | || || || || ||||| || || ||||| |||||||||||||| || || Sbjct 1793509 GAAC---GTAGAGAAGGTGATTTGGGACCAGTTTACGGATTCCAGTGGAGACATTTCGGA 1793565 Query 34439 GCGGAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTAC 34498 || || || || | || | ||||| | || || ||| |||||| |||| | Sbjct 1793566 GCTGAATACAAGGATTGTGACACAGACTACACCGGTCAAGGATTTGACCAGTTGCAAGAT 1793625 Query 34499 GTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAAC 34558 || ||| | | || ||| ||||| | |||||||| || | |||| ||| ||||| Sbjct 1793626 GTCATCAAGAAGTTAAAGACAAACCCATACGACAGAAGAATTATCATGTCCGCTTGGAAT 1793685 Query 34559 CC 34560 || Sbjct 1793686 CC 1793687 Score = 82.4 bits (90), Expect = 7e-11 Identities = 165/242 (68%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 6785 GGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATC 6844 || ||||| ||| |||| | || |||||||| | ||||| ||| || | | ||| Sbjct 1793687 GGATTCCAAGCGGACATGATAATTCTTCTGTCGTATGGGTTTGTCTTTAACTTCTTGATG 1793628 Query 6845 ACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCC 6904 || | |||| |||||| ||| || || | ||||| | || | || || || Sbjct 1793627 ACATCTTGCAACTGGTCAAATCCTTGACCGGTGTAGTCTGTGTCACAATCCTTGTATTCA 1793568 Query 6905 GCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTC-CTCCCGAGA 6963 || || || |||||||||||||| ||||| || || ||||| || || || || | | Sbjct 1793567 GCTCCGAAATGTCTCCACTGGAATCCGTAAACTGGTCCCAAATCACCTTCTCTAC---GT 1793511 Query 6964 TGGG--AACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACC 7021 | || || ||| |||||||| || || ||||| || | | |||||||| ||||| Sbjct 1793510 TCGGTCAAACCCAACTTGTCCAAGAACTCACGAGATCCATTTCCTTCCCAGATTTTCACG 1793451 Query 7022 CC 7023 || Sbjct 1793450 CC 1793449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262327157360