Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq2 174 4e-38
seq4 156 1e-32
>seq2
Length=2390349
Score = 174 bits (192), Expect = 4e-38
Identities = 161/204 (79%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||||||||| || ||||||||||| || || | ||| || || |||||||||| ||
Sbjct 2169416 GTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCATCTTCCAATTG 2169475
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| | | |||||||||||| |||| ||||||||||| ||||||||
Sbjct 2169476 CTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTT 2169535
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| ||||| ||||||||| ||||| || |||||||| ||||| || ||
Sbjct 2169536 GGACTTAACGTTGTCGATAGTGTCAGAGGACTCAACTTCAAGAGTGATAGTCTTACCAGT 2169595
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| |||||| || || | |||||
Sbjct 2169596 CAAAGTCTTGACGAAAATTTGCAT 2169619
Score = 168 bits (186), Expect = 2e-36
Identities = 167/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| || | |||||||||||| |||||||| ||||| || || | || || || ||
Sbjct 2169929 TCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTACC 2169988
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || |||||||| | || ||||||||||| |||| ||||||||
Sbjct 2169989 GTCTTCCAATTGCTTACCAGCGAAGATTAAACGCTGTTGGTCAGGTGGAATACCTTCCTT 2170048
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || ||||| ||||| |||||||| ||||||||||| |||||
Sbjct 2170049 GTCTTGGATCTTAGACTTAACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTGAT 2170108
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| || || | |||||
Sbjct 2170109 GGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2170144
Score = 165 bits (182), Expect = 2e-35
Identities = 169/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| || | |||||||||||| |||||||| ||||| || || | ||| || || ||
Sbjct 2170385 TCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTACC 2170444
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || ||||| || | | |||||||||||| |||| ||||||||
Sbjct 2170445 GTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 2170504
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || ||||| || |||||||||||| || || || ||||||||
Sbjct 2170505 GTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCGACTTCAAGAGTGAT 2170564
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTAT 211119
||||| || || | ||||| || || | |||||| |||
Sbjct 2170565 AGTCTTACCTGTTAATGTCTTAACGAAGATTTGCATTGTAT 2170605
Score = 141 bits (156), Expect = 2e-28
Identities = 161/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| || | |||||||||||| || ||||||||||| || || | ||| || || ||
Sbjct 2170157 TCTTAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACC 2170216
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || ||||| || | | |||||||||||| |||| ||||||||
Sbjct 2170217 GTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 2170276
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || ||||| ||||| ||||| || || || || | || ||
Sbjct 2170277 GTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGACTCGACTTCCAAGGTAAT 2170336
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| || || | |||||
Sbjct 2170337 GGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2170372
>seq4
Length=2182181
Score = 156 bits (172), Expect = 1e-32
Identities = 166/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| ||| | ||| | |||||||| || |||||||| || || | |||||| || ||
Sbjct 2128791 TCTTAAGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACC 2128850
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| |||||| || |||||||| | | |||||||||||| |||| ||||||||
Sbjct 2128851 GTCTTCCAACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 2128910
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|||||||||||| || || || || |||||||| ||| || || || | || ||
Sbjct 2128911 GTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAAT 2128970
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | |||||| || || | ||||||||
Sbjct 2128971 GGTCTTACCTGTTAAAGTCTTGACGAAAATTTGCATTTT 2129009
Score = 84.2 bits (92), Expect = 5e-11
Identities = 198/299 (66%), Gaps = 0/299 (0%)
Strand=Plus/Minus
Query 178085 ATTCCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGC 178144
|| || ||||||||||||||| |||| || | |||||| |||||| ||||| ||
Sbjct 350703 ATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCATCCTTGTACAACATGAAAGGA 350644
Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204
| || |||| ||||| | | || | ||| | || || || ||||||
Sbjct 350643 GTACCGGTTTCAGTCTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCTTGACAGTG 350584
Query 178205 TTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAG 178264
||| | || ||||||| ||||||| || ||| | |||||||||||| || ||
Sbjct 350583 TTTCTACCTCTTCCTTCTCTCTCGTAACGTTCGTATAACTCCTCGAATTCGTCACCGTAA 350524
Query 178265 ACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTC 178324
|| || | || ||||| || || || |||| ||| |||| | ||||| || |
Sbjct 350523 ACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCAATCACCGTTTTGTTCG 350464
Query 178325 ACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAATCTCTCTGGCTCTCAT 178383
|||| |||||||| | || | |||| | || ||| | ||||||||||| ||
Sbjct 350463 ACTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAGTCTCTGGCTCTGAT 350405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151806928745
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |