Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 1e-13 >seq2 Length=2390349 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||||||||| |||| ||| | ||| |||||||||||||| ||||| || | Sbjct 2170374 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAA 2170433 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| | ||||||||||| || || || | || | ||||||||||| || Sbjct 2170434 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGA 2170493 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | ||||| ||||| || || || || | | | | || || | |||| | Sbjct 2170494 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCGACT 2170553 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || | || ||||| || || || ||||| |||| || ||||||||| Sbjct 2170554 TCAAGAGTGATAGTCTTACCTGTTAATGTCTTAACGAAGATTTGCATT 2170601 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/233 (69%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 101007 TATTG-CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAA 101065 ||||| || |||| |||||| || |||| ||| | ||| ||||| ||||| || ||||| Sbjct 2169387 TATTGACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAG 2169446 Query 101066 TCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCT 101125 || | | |||| || |||||||||||| || || || | || | ||||||||||| Sbjct 2169447 TCAGAAAGAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCA 2169506 Query 101126 ACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGAC 101185 || | ||||| ||||| || || || || | | | | || || | |||| Sbjct 2169507 GGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCAGAGGAC 2169566 Query 101186 GTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | || ||||| || || ||||| || || | ||||||||||| Sbjct 2169567 TCAACTTCAAGAGTGATAGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 2169619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409660735094367