Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4 233 2e-56 >seq4 Length=2182181 Score = 233 bits (258), Expect = 2e-56 Identities = 570/856 (67%), Gaps = 17/856 (2%) Strand=Plus/Minus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||||||| |||||||| || |||| ||| |||||||| || || || || | || Sbjct 398249 AACACCAGCCTTTTGGTAGTCACTGACTCTCTTCTCGAAGAAGTTGGTCTTACCAGCCAA 398190 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTA 4365 || || |||||||| || || || || || || ||||||| | || || || | Sbjct 398189 AGAGATGTTTTCCATGAAGTCGAATGGGTTGGTGACGTTGTAGACCTTCTTGTTACCCAA 398130 Query 4366 GAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAA 4425 ||| | | |||| ||| || || ||||| | || |||| ||| | ||| ||| | Sbjct 398129 -AGCAATCAATAATCTGTCGGCAACGAATTCGACGTATTGGCACATCAACTCGGCGTTCA 398071 Query 4426 TTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485 | || | || || || | |||| || || || ||||| || || | ||||| | Sbjct 398070 TACCCAACAAGGAGACTGGCAAAGCGTCGGTGAAGAATTCTTGCTCAATCTTGACGGCCT 398011 Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATA 4545 | ||||| || | | | || || |||| | ||| |||| || || | Sbjct 398010 CAGTGATGATCTTCTCAACAATAACTGGGTCTGGTCTGTTTTGCAAGTGGGAGAATAACA 397951 Query 4546 AACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTA 4605 |||| || || ||| ||||||||||| ||||||| |||| |||||||| || || | Sbjct 397950 AACAGGCGAAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAACTCGTTAGAGAAAGTCA 397891 Query 4606 ATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGA 4665 | || ||||| ||||||||||| || | ||| || || | || || || ||| |||| Sbjct 397890 AACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCGAAAGAACCACTGAAGA 397831 Query 4666 ATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTT 4725 | || ||||| ||||| ||||| || ||||||| |||||| | ||| | || | Sbjct 397830 AAATACCTTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAA---GGCCTCATCAT 397774 Query 4726 TA---ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782 | |||||| | || ||||| | ||| || || | | ||| ||||| ||| || | Sbjct 397773 CAGAGATCCATCTCAAAGCCCAATCAGCCTTCTTTCTGATGCATGGAATGTTGTCAATGG 397714 Query 4783 CGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839 |||| || || | | || | | ||||| | || |||||||| |||| | Sbjct 397713 CGTTGAAAAGGAAGTCAGCTTCCTTA---GGGTCCTTAACGTAAGTGTCAATTAACAAAG 397657 Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899 || | || || || || ||||| || || || || ||||| || || | |||| Sbjct 397656 AGTAAGTCTCGGAGTGAATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTT 397597 Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959 ||| | ||| |||||| | | || | || || ||||| ||||| || ||||||||| Sbjct 397596 CTGGGATTTGGACTTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACGATACCGTCAG 397537 Query 4960 TGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCG-TCAGGCTTAAGTTTT 5018 ||| || || || ||||| | | | || || ||||| |||| || | |||| || | Sbjct 397536 AGGCGGCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTTAACTTGT 397477 Query 5019 --TTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076 ||||||| | ||| ||| | || || | ||||||| ||||||| || || |||| Sbjct 397476 GGTTCCAGTCAGTGGTATCCTTACTCAAGTCGATTTCTTCAGCAGTCCAGAAGGAAGCTT 397417 Query 5077 CCGCTTTTTTGTACAT 5092 | || || |||||||| Sbjct 397416 CAGCCTTCTTGTACAT 397401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049532339329