Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq4 223 5e-53 seq5 104 3e-17 >seq4 Length=2182181 Score = 223 bits (246), Expect = 5e-53 Identities = 1415/2245 (63%), Gaps = 42/2245 (2%) Strand=Plus/Minus Query 76821 TAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTG 76880 |||||||||||||| || | |||| |||| |||||||||||||| || || || Sbjct 351660 TAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAGAGGTAAGCTTA 351601 Query 76881 GAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCT 76940 | || || || || || |||| ||||| |||||| ||||| || || Sbjct 351600 CCCATTGTTGGGTCCTTGATGTGGATGTTCAATGACTGTGATTGATCAATGAAGGCGGCT 351541 Query 76941 CTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACT 77000 || ||||| ||||| | || || |||||| | || ||||||| || ||| | | Sbjct 351540 CTGTCAGCAGCCATGTCAATGATATGCTTTTGTGAGATCTCCCAAACGGTCTTGTATAAG 351481 Query 77001 TGTTTGATATCATCTGGAAGGTTTGTATTT---TGAATGGAACCACCATCTGATATAATT 77057 |||| || ||||||| ||| | | || || |||||| | || || || Sbjct 351480 GCCTTGAGCTCGTCTGGAATGTTAGGCAATGACTGGATAGAACCATTGTTAGAAATGATA 351421 Query 77058 GTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGA 77117 | ||||| || ||| ||||| | | || || | | | | | || Sbjct 351420 TTGTTCTTCATGGAATCGTTCCAGATACCCAAGTCAACCAAGTCACGCAACAAGTATGGG 351361 Query 77118 TTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGT 77177 || || ||||| ||||| |||| ||| ||||| | | ||| || ||| ||| ||||| Sbjct 351360 TTGACAATTTGGAATTCACCAGCCAACACTCTTCTTGAGTAGATGTTAGAGGTGTATGGC 351301 Query 77178 TCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACC 77237 || | | |||| ||||| ||||| ||||| | ||||||||||||||||| || || || Sbjct 351300 TCGAAACATTCGTTGTTACCCAAGATTTGGGAGGTAGAAGCAGTTGGCATTGGAGCAACT 351241 Query 77238 AATAAACTATTTCTGAGACCATGTGTT-CTGATTTTATCTTTTAGATATTTCCAATCCCA 77296 ||||| ||||| | ||| || | | | ||| ||| || || ||||||||| Sbjct 351240 AATAAGGAGTTTCTCAAACCGTGCTTGGCCAACTTTTGCTTCAAGGCATC-CCAATCCCA 351182 Query 77297 AAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGA 77356 | || | || ||||| | || |||| | | || | | || || Sbjct 351181 CAACTCAGTTGGCTTTCTCTCCCACAAGTCAAATTGCAACAAGCCTTGAGATGCTGGAGA 351122 Query 77357 TCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGC 77416 || | || | ||| ||||| |||||| ||||| ||| | ||||| | || Sbjct 351121 ACCCTCGTAAGATTCGTAAGGACCTTCTTCAGAAGCTAACTCAATAGAGGCTTCGACGGC 351062 Query 77417 TCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAA 77476 |||| || || || |||||||| | |||| | ||| ||||| | || || Sbjct 351061 ACCGTGGTAGATAGTCTCGAAAATTTGAATATTTAATTCTCTAGCTTCTTGAGAGTCGAA 351002 Query 77477 CGGATAATGTAAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTC 77535 || |||| | || | || || | ||| || || || ||||| || | |||| |||| Sbjct 351001 TGG-TAATCTCAATGCCATGAAAGTATCAGCCAAACCTTGAACACCCAAGGCAATTGGTC 350943 Query 77536 TATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTT 77595 ||| ||| || || || | | |||||||||| || || || || |||| || || | Sbjct 350942 TATTTCTTTTGTTAGATCTCTCGGCTTCTGGAACTGGGTAGTAGTTTCTGTCGATGATCT 350883 Query 77596 TATTGAGATTTC---TAACA-ACT-----ACTTTAACCACGTCCTTTA-GTT-TA--AGA 77642 | || | || | | ||| ||| |||| || | || | ||| || | | Sbjct 350882 TGTTCAAGTTACGGGTGACAGACTTAGTGACTTCGTGCAACTTCTCGAAGTTGTACCACA 350823 Query 77643 AAATCAAATCTTCCATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACT 77702 || | || ||| ||| ||| ||| |||||| || || || | ||||| || Sbjct 350822 AAGACTTGTCATCCTTCTCAGCGAAAGATGG-CAAAGCGATCGAGGCCAAGTTACAGACA 350764 Query 77703 GCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATA 77762 || || || | | || || | | ||||| ||| | ||| | | ||||| Sbjct 350763 GCAACTTCTTCTGGAGAGGAGTACTCAACGATCTCACAACACAAGTTAGAAGACTTGATT 350704 Query 77763 GTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGA 77822 | |||| || | ||||||| |||| || || || | ||||| || | || || ||| Sbjct 350703 ATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAGGCATCCTTGTACAACATGAAAGGA 350644 Query 77823 GTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCA 77880 || ||||||||| |||| | ||| | |||| | ||| | ||| | ||| || | || Sbjct 350643 GTACCGGTTTCAGTCTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGCCTTGA-CA 350587 Query 77881 TAGATTTGTATCGCCTC--TCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCC 77938 | ||| || | | || ||||| || || | |||| | || ||||| || || Sbjct 350586 GTG-TTTCTACCTCTTCCTTCTCTCTCGTAACGTTCGTATAACTCCTCGAATTCGTCACC 350528 Query 77939 CCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTC 77998 |||| || ||| || || ||| ||||| | | | | ||| ||||| | || Sbjct 350527 GTAAACTTCTGGCAAGCCTGGAGCTTCGTTTGGAGAGAAAAGAGTCCAATCACCGTTTTG 350468 Query 77999 CTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCT 78058 | |||| ||||| || | ||| || ||||| | ||| || | |||| || ||| Sbjct 350467 TTCGACTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAGTCTCTGGCTCT 350408 Query 78059 ATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCA 78118 |||||| || || ||||||| | | || | || || | || || | ||||| Sbjct 350407 GATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTCTGCGTGCCA 350348 Query 78119 TGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCT 78178 ||| || | || | || | | | || || || || ||||| || || || | ||||| Sbjct 350347 TGGCTCCAAGTACAAGGCAAAAGCACCTGGACGCTTGTTACCACCTTGGTCAACGTATCT 350288 Query 78179 GGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCC 78238 || ||||| || | || | | |||||||||||||||||| || || ||||| || || Sbjct 350287 AGCAGTGTTGTTGAAGACACGAACCATTGGAATAATACCGTTCGAGGTACCATTAGTACC 350228 Query 78239 AGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCAT 78298 || ||| ||| ||| | | || || || |||| | || || || || || | Sbjct 350227 AGCAATGTAAGCACCAGTGGAACGGATGTTGTGAATGTGCAAACCAATACCACCAGCACT 350168 Query 78299 CTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCAT 78358 ||| || || | || || ||||| |||||||| ||||| || ||| ||| ||| | Sbjct 350167 CTTGGAAATCAAGGCACAGGTCTTCAAGGTATCGTAAATACCATCAATAGAGTCGTCCTT 350108 Query 78359 CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGT 78418 |||| | ||| ||||| ||||||||| || || || || || || || || Sbjct 350107 CATGGCGACAAGGAAACAAGAAGACATTTGTGGAGATGGGGTACCAGCGTTGAACAAAGT 350048 Query 78419 CGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTC 78478 ||||| | || || || | || ||| | | || || | |||||| | || Sbjct 350047 TGGAGAACCGTGGGTGAAGAAACGTTGAGACATCAAGTTATAAGATTCAATGACCTTCTC 349988 Query 78479 TATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAA 78537 ||||| || | ||||| || | | || | ||| | || ||| || ||||||||| Sbjct 349987 AATGTCGTCACCG-TGAATACCAATAGAAACTCTCATGATCAAATGTTGTGGTCTTTCAG 349929 Query 78538 CCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGT 78597 | ||| || | || | ||| ||| | || ||||| || ||||| || |||| Sbjct 349928 CGACCTTGCCGTTGACACGTAAAAGGTAGGATCTCTCTAAAGTCTTGAAACCGAAGTAGT 349869 Query 78598 TGTA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGT 78655 |||| ||||| || | ||||||| ||| |||| || | | || || ||| Sbjct 349868 TGTAGTTGAAA--TCACGGTCGTAAACAATGGCAGAGTTCAACTCGTCCGAGTGCTTGAG 349811 Query 78656 AACAATATC-CATGACAGTAGTT-GAAATAATAGGAGATCGTACACCATTTTTAGGATTA 78713 | ||||| ||| | || || || |||||||| | | ||| | || || || Sbjct 349810 GATGATATCGTATG--TTTCCTTAGAGATCATAGGAGAGTGCAATCCAGTCTTTGGGTTG 349753 Query 78714 ACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGA 78773 | |||| | || |||| || | || | || | |||| |||||| | Sbjct 349752 ATGTAGTCGTACAACTCTTTGGACACGGCGGAGTATTGCTTGGTGGTTTGCTTGTGCAAG 349693 Query 78774 TTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT- 78832 || || ||||| ||||| || || ||||| || || || || || ||||| || || Sbjct 349692 TTGGAAACAGCGATTCTAGCGGCGAGAATGGCGTAGTCCGGGTGAATGGTAGT-CATGTA 349634 Query 78833 GGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCC 78892 ||| || | || || || || | || ||||| || || ||||| |||| ||| | || Sbjct 349633 GGCGGCAGTCTCAGCAGCCAAGTTGTCCAACTCGATGGTGGTGACACCATGATAGACACC 349574 Query 78893 TTGAATAACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACA 78952 ||| ||| || || ||| ||| | || || | | || ||| || ||||| Sbjct 349573 AGAAATCACTCTCTGGGTGATAGCGACCGCGTCGACGTGTTTTGGGTCCAACCCGTAACA 349514 Query 78953 TAATTTTCTAATACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCATTTCG 79012 |||| | | | | ||||||||||| || || |||||||| || | ||| Sbjct 349513 TAATCTCTGGACTCTGGCGGTGATTTTATCGAAGCGCACTGGCTCCTTGCGGCCGTCTCG 349454 Query 79013 TTTAATAACGAACATCGTTTGGTAT 79037 ||| | || |||| | ||||||| Sbjct 349453 TTTGTTGACATACAT-GGTTGGTAT 349430 Score = 168 bits (186), Expect = 9e-37 Identities = 392/590 (66%), Gaps = 6/590 (1%) Strand=Plus/Minus Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197 ||||| || || ||| || | |||||||||||| | || || |||||||| || || Sbjct 397951 AAACAGGCGAAGTCAGTGTGCAAACCTTCATCTCTGCAGATCAACTCGTTAGAGAAAGTC 397892 Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257 | ||| ||||| | || | || || | ||| || || | |||||||| ||| ||| Sbjct 397891 AAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAAGCGAAAGAACCACTGAAG 397832 Query 48258 AATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT 48317 || || ||||| ||||| ||||| || | ||| || ||| | ||| || | | Sbjct 397831 AAAATACCTTCAACGGCAGCAAAAGCAACTAATCTTTCACCGAACAAGGCCTCATCATCA 397772 Query 48318 ---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 48374 ||||| | ||||||||||||||||| | | || || || | || || || Sbjct 397771 GAGATCCATCTCAAAGCCCAATCAGCCTTCTTTCTGATGCATGGAATGTTGTCAATGGCG 397712 Query 48375 TTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATAC 48434 || || || |||| ||| || || ||||||||||| || ||||| | | || Sbjct 397711 TTGAAAAGGAAGTCAGCTTCCTTAGGGTCCTTAACGTAAGTGTCAATTAACAAAGAGTAA 397652 Query 48435 ATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTG 48494 | ||||||||||| ||||| || || || || ||||| ||||| | ||||||| | Sbjct 397651 GTCTCGGAGTGAATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCTGGG 397592 Query 48495 ATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCA 48554 || || || || | | | || || |||| ||||| || || || || ||| || Sbjct 397591 ATTTGGACTTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACGATACCGTCAGAGGCG 397532 Query 48555 GCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTT---ATTC 48611 || || || || || | | | ||| || ||| ||||||| | | || ||| Sbjct 397531 GCGAAGAAAGCCAAGATACGGGAAATGAAGTATCTTTCGTTCTTGTTTAACTTGTGGTTC 397472 Query 48612 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCT 48671 |||||| || |||| || | || | ||||||||| ||||| || || || || || Sbjct 397471 CAGTCAGTGGTATCCTTACTCAAGTCGATTTCTTCAGCAGTCCAGAAGGAAGCTTCAGCC 397412 Query 48672 TTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 || || ||||| | ||| | || ||| | ||||||||| | ||| || Sbjct 397411 TTCTTGTACATTTGCCAGACTTCGTGGTACTTGATTGGGAAGAGAACGAA 397362 >seq5 Length=1741095 Score = 104 bits (114), Expect = 3e-17 Identities = 211/311 (68%), Gaps = 2/311 (1%) Strand=Plus/Plus Query 77926 CAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACC 77985 ||||||| ||||| | || | ||||| || ||||| ||| | | ||| |||| Sbjct 324018 CAAATTCTTCTCCGTAGCAGTCTGCTAATCCGGGAGCTTCATCTGGAGAAAACAAAGACC 324077 Query 77986 AGTCACCATC-TTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 |||| ||| || | || ||| | ||| || | ||| || ||||||| ||| ||| Sbjct 324078 AGTCTTCATTGTTTCGTA-CTCTCTCCATGAACAAATCGGGAATCCATAACCCAAAAAAC 324136 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 | ||||| || || | ||||| || || ||||| || | || | || ||| | Sbjct 324137 AAGTCTCGTGTCCTGAGCTCTTCCTTGCCGTGGTTCTTCTTCAAGTCTAAAATCTCGAAT 324196 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 | ||||| |||||||||||| | |||||| || | | || |||| |||||| |||||| Sbjct 324197 ACATCAGCATGCCATGGTTCCAAATATATAGCAAAGGCCCCTGGTCTTTTATTTCCTCCC 324256 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 ||||| | ||||| || || | || | ||| | | ||| |||| | ||| | | Sbjct 324257 TGATCCACGTATCTAGCTGTATCGTTGAAGACTTTAAGCATAGGAACCAAACCACTTGCC 324316 Query 78225 GTTCCATTTGT 78235 |||||||| || Sbjct 324317 GTTCCATTGGT 324327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668687116320