Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03-
24] 13 sequences; 16,750,582 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq2 188 1e-42
seq4 143 6e-29
seq3 89.7 1e-12
>seq2
Length=2390349
Score = 188 bits (208), Expect = 1e-42
Identities = 157/192 (82%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| ||| || | |||||| || | ||| || || || ||
Sbjct 2169428 TTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCATCTTCCAATTGCTTACCAGCGAA 2169487
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | |||||||||| |||||||| ||||||||||||||||| | || ||| |
Sbjct 2169488 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTT 2169547
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||||||||| || | || ||||| |||||||| |||||||| ||||||||||| ||
Sbjct 2169548 GTCGATAGTGTCAGAGGACTCAACTTCAAGAGTGATAGTCTTACCAGTCAAAGTCTTGAC 2169607
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 2169608 GAAAATTTGCAT 2169619
Score = 176 bits (194), Expect = 9e-39
Identities = 154/192 (80%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||||||||| ||||||||||||| || || | || || || | ||| || || || ||
Sbjct 2169953 TTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAA 2170012
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| ||||| ||||||||| |||||||| ||||||||||||||||| | || ||| |
Sbjct 2170013 GATTAAACGCTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGACTTAACGTT 2170072
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||||||||| |||| || || ||||| ||||| |||||||| ||||||||||| ||
Sbjct 2170073 GTCGATAGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTACCAGTCAAAGTCTTGAC 2170132
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 2170133 GAAAATTTGCAT 2170144
Score = 170 bits (188), Expect = 4e-37
Identities = 153/192 (80%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| ||| || | || || || | ||| || || || ||
Sbjct 2170181 TTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAA 2170240
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | |||||||||| |||||||| ||||||||||||||||| | || ||| |
Sbjct 2170241 AATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTT 2170300
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||||||||| |||| |||||||| | || || |||||||| ||||||||||| ||
Sbjct 2170301 GTCGATAGTGTCGGAAGACTCGACTTCCAAGGTAATGGTCTTACCAGTCAAAGTCTTGAC 2170360
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 2170361 GAAAATTTGCAT 2170372
Score = 168 bits (186), Expect = 1e-36
Identities = 153/193 (79%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||||||||| ||||||||||||| ||| || | || || || | ||| || || || ||
Sbjct 2170409 TTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAA 2170468
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | |||||||||| |||||||| ||||||||||||||||| | || ||| |
Sbjct 2170469 AATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTT 2170528
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| || | |||||||| |||||||| |||||||| || || ||||||||
Sbjct 2170529 GTCAATGGTGTCAGAGGACTCGACTTCAAGAGTGATAGTCTTACCTGTTAATGTCTTAAC 2170588
Query 283088 GAATATCTGCATT 283100
||| || ||||||
Sbjct 2170589 GAAGATTTGCATT 2170601
>seq4
Length=2182181
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| || || |||||||||||||||| ||| || | || || ||
Sbjct 2128798 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCTTCC 2128857
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| || || || || |||||||| | |||||||||| |||||||| |||||||| |||
Sbjct 2128858 AACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGG 2128917
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || ||||| || | |||||||| | || || ||||||
Sbjct 2128918 ATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTA 2128977
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || |||||||| ||||| || ||||||||
Sbjct 2128978 CCTGTTAAAGTCTTGACGAAAATTTGCATTTT 2129009
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 273503 CTCGATCTTACCTTTGAAACCTTTGTACCACGGCTTCATGGCTACCATAGGTTCACCCTT 273562
||| ||| ||||| | ||||| ||||| ||| |||| || ||| |||||||| ||
Sbjct 1944490 CTCAATCAAACCTTCCCATCCTTTATACCAAGGCATCATATCTTTCATGGGTTCACCGTT 1944549
Query 273563 CATCAGTCGCTCCACATTACCAATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGA 273622
||||| ||| | | || ||| | ||| | || ||| |||| |||| ||||||||
Sbjct 1944550 CATCAATCGTTTGATGTTGTCAACCAAATCCATGGGATTGAAACTAGGAATATTCGTAGA 1944609
Query 273623 CCAACCGGTGCCAATACCGGAAGAACCATTCACCA 273657
|||||| || || ||||| | |||||||||||
Sbjct 1944610 CCAACCCGTACCGATACCTTCGGTACCATTCACCA 1944644
>seq3
Length=2328052
Score = 89.7 bits (98), Expect = 1e-12
Identities = 128/179 (72%), Gaps = 6/179 (3%)
Strand=Plus/Minus
Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085
|| ||||| ||||| | |||||||| | || || ||||||| || ||||| ||||||
Sbjct 1754426 GTTGGGAAACCTTCGACTTGACCGTTAGCGATAGCTCTCATCAAGGTAGACTTACCAGCA 1754367
Query 317086 CCATTGGGGCCGCAAAGACCATACCGA---TTTCCCTTCTTCAGATTAAAACGGGTGTTG 317142
|| || || || || | |||||| | |||| |||||| | || |||| |||
Sbjct 1754366 CCGTTTGGACCACACAAACCATATCTTCTGTTTC---TCTTCAATCTGAATTGGGTCTTG 1754310
Query 317143 TTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
|||| | ||||| |||| || |||| |||||||||||| | ||| | ||| || ||
Sbjct 1754309 TTCAACAAGATCTTGGCACCGTAAGCCAAAGAGAACTCACAGTTACATAAGTCTTCACC 1754251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739025652502
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |