Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2 188 1e-42 seq4 143 6e-29 seq3 89.7 1e-12 >seq2 Length=2390349 Score = 188 bits (208), Expect = 1e-42 Identities = 157/192 (82%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| ||| || | |||||| || | ||| || || || || Sbjct 2169428 TTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCATCTTCCAATTGCTTACCAGCGAA 2169487 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||||||| |||||||| ||||||||||||||||| | || ||| | Sbjct 2169488 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTT 2169547 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||||||||| || | || ||||| |||||||| |||||||| ||||||||||| || Sbjct 2169548 GTCGATAGTGTCAGAGGACTCAACTTCAAGAGTGATAGTCTTACCAGTCAAAGTCTTGAC 2169607 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 2169608 GAAAATTTGCAT 2169619 Score = 176 bits (194), Expect = 9e-39 Identities = 154/192 (80%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||||||| ||||||||||||| || || | || || || | ||| || || || || Sbjct 2169953 TTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAA 2170012 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| ||||| ||||||||| |||||||| ||||||||||||||||| | || ||| | Sbjct 2170013 GATTAAACGCTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGACTTAACGTT 2170072 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||||||||| |||| || || ||||| ||||| |||||||| ||||||||||| || Sbjct 2170073 GTCGATAGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTACCAGTCAAAGTCTTGAC 2170132 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 2170133 GAAAATTTGCAT 2170144 Score = 170 bits (188), Expect = 4e-37 Identities = 153/192 (80%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| ||| || | || || || | ||| || || || || Sbjct 2170181 TTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAA 2170240 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | |||||||||| |||||||| ||||||||||||||||| | || ||| | Sbjct 2170241 AATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACGTT 2170300 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||||||||| |||| |||||||| | || || |||||||| ||||||||||| || Sbjct 2170301 GTCGATAGTGTCGGAAGACTCGACTTCCAAGGTAATGGTCTTACCAGTCAAAGTCTTGAC 2170360 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 2170361 GAAAATTTGCAT 2170372 Score = 168 bits (186), Expect = 1e-36 Identities = 153/193 (79%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||||||| ||||||||||||| ||| || | || || || | ||| || || || || Sbjct 2170409 TTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTACCGTCTTCCAATTGCTTACCAGCGAA 2170468 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | |||||||||| |||||||| ||||||||||||||||| | || ||| | Sbjct 2170469 AATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTT 2170528 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| || | |||||||| |||||||| |||||||| || || |||||||| Sbjct 2170529 GTCAATGGTGTCAGAGGACTCGACTTCAAGAGTGATAGTCTTACCTGTTAATGTCTTAAC 2170588 Query 283088 GAATATCTGCATT 283100 ||| || |||||| Sbjct 2170589 GAAGATTTGCATT 2170601 >seq4 Length=2182181 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| || || ||| || || |||||||||||||||| ||| || | || || || Sbjct 2128798 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCTTCC 2128857 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | || || || || |||||||| | |||||||||| |||||||| |||||||| ||| Sbjct 2128858 AACTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGG 2128917 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || || ||||| || | |||||||| | || || |||||| Sbjct 2128918 ATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTA 2128977 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || |||||||| ||||| || |||||||| Sbjct 2128978 CCTGTTAAAGTCTTGACGAAAATTTGCATTTT 2129009 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 273503 CTCGATCTTACCTTTGAAACCTTTGTACCACGGCTTCATGGCTACCATAGGTTCACCCTT 273562 ||| ||| ||||| | ||||| ||||| ||| |||| || ||| |||||||| || Sbjct 1944490 CTCAATCAAACCTTCCCATCCTTTATACCAAGGCATCATATCTTTCATGGGTTCACCGTT 1944549 Query 273563 CATCAGTCGCTCCACATTACCAATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGA 273622 ||||| ||| | | || ||| | ||| | || ||| |||| |||| |||||||| Sbjct 1944550 CATCAATCGTTTGATGTTGTCAACCAAATCCATGGGATTGAAACTAGGAATATTCGTAGA 1944609 Query 273623 CCAACCGGTGCCAATACCGGAAGAACCATTCACCA 273657 |||||| || || ||||| | ||||||||||| Sbjct 1944610 CCAACCCGTACCGATACCTTCGGTACCATTCACCA 1944644 >seq3 Length=2328052 Score = 89.7 bits (98), Expect = 1e-12 Identities = 128/179 (72%), Gaps = 6/179 (3%) Strand=Plus/Minus Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085 || ||||| ||||| | |||||||| | || || ||||||| || ||||| |||||| Sbjct 1754426 GTTGGGAAACCTTCGACTTGACCGTTAGCGATAGCTCTCATCAAGGTAGACTTACCAGCA 1754367 Query 317086 CCATTGGGGCCGCAAAGACCATACCGA---TTTCCCTTCTTCAGATTAAAACGGGTGTTG 317142 || || || || || | |||||| | |||| |||||| | || |||| ||| Sbjct 1754366 CCGTTTGGACCACACAAACCATATCTTCTGTTTC---TCTTCAATCTGAATTGGGTCTTG 1754310 Query 317143 TTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 |||| | ||||| |||| || |||| |||||||||||| | ||| | ||| || || Sbjct 1754309 TTCAACAAGATCTTGGCACCGTAAGCCAAAGAGAACTCACAGTTACATAAGTCTTCACC 1754251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739025652502