Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20shehatae_20[genbank_20GCA_5F002118155.1_202017-03- 24] 13 sequences; 16,750,582 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 5e-15 seq7 93.3 6e-14 >seq1 Length=3044122 Score = 96.9 bits (106), Expect = 5e-15 Identities = 155/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532 |||| ||||| ||||| |||||||| || || ||||||||||| ||||| |||| Sbjct 1793519 AAGGTGATTTGGGACCAGTTTACGGATTCCAGTGGAGACATTTCGGAGCTGAATACAAGG 1793578 Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592 |||| ||| | | ||| |||||||| | || || ||||| | | || | || || Sbjct 1793579 ATTGTGACACAGACTACACCGGTCAAGGATTTGACCAGTTGCAAGATGTCATCAAGAAGT 1793638 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 | || |||||||| |||| | | ||| | ||| |||| ||||||||| | || | | Sbjct 1793639 TAAAGACAAACCCATACGACAGAAGAATTATCATGTCCGCTTGGAATCCACCAGACTTTG 1793698 Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTA 50695 | | | ||||| || |||||||| || || || || || Sbjct 1793699 GAAAGATGGCCTTACCACCATGTCATGTCTTCTGCCAGTTCTA 1793741 Score = 86.0 bits (94), Expect = 8e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 50741 TGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGAT 50800 ||| |||||||| || ||||| || ||| | ||||| ||||| | ||||| | |||| Sbjct 1793844 TGACATGGGTTTGGGTGTTCCATTTAACATTGCTTCCTACGCCCTTTTAACTAAGATGAT 1793903 Query 50801 CGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATAT 50860 || || || || ||| | || || ||||||||||| || ||||| || ||| | Sbjct 1793904 AGCACACATAGTAGACATGGATTGTGGCGAGTTTATTCATACATTGGGAGATGCACATGT 1793963 Query 50861 TTACCTCGATCACGTCGATGCTTTAAAGGAGCAATTGACTCGAAC 50905 || | |||||| | ||||| | ||||||||||| || |||| Sbjct 1793964 GTATTTGGATCACATAGATGCACTCAAGGAGCAATTTACAAGAAC 1794008 >seq7 Length=1357872 Score = 93.3 bits (102), Expect = 6e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 155889 CCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAAT 155948 ||||| |||||||| ||| |||||| |||| | ||| || | || ||||| || || Sbjct 260743 CCCTTCTCATCGGGCAATGAAATTTCGATCTGGATTTCGAATCTTCCTGGTCTCAACAAA 260684 Query 155949 GCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGAT 156008 ||| | || || || || ||||||||||||||| || | ||| || ||||| || Sbjct 260683 GCTGCATCGATCAAATCCAATCTGTTGGTCATACCAATTACTAAGATATTGTTCAATTGG 260624 Query 156009 TCTACACCGTCTATTTTAGACAATAATTGATTGACTACG 156047 || ||||| || || || || |||||||| || || ||| Sbjct 260623 TCAACACCATCCATCTTGGATAATAATTGGTTAACAACG 260585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667075091600280