Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq333 197 1e-45
>seq333
Length=169781
Score = 197 bits (218), Expect = 1e-45
Identities = 585/897 (65%), Gaps = 15/897 (2%)
Strand=Plus/Plus
Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722
|||||| |||||| |||||| ||| | ||||| || || ||||| || || |||
Sbjct 13654 AACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCTAA 13713
Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAG 16782
|| |||||||||||||||||||| |||||||| | | ||| || | || |
Sbjct 13714 GGAAATATTCTCCATGAAATCAAATGGATTAGTTACATTATATACCTTCTTATTACCAAA 13773
Query 16783 TTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCAT 16842
| | | ||||||||| |||||||| || | |||||| ||||||||| | |||||||
Sbjct 13774 AGCAACCAATAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGTTCAT 13833
Query 16843 TCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTC 16902
|||| | || || || | ||| || || ||| || | || ||| |||| |||||
Sbjct 13834 ACCTAACAAACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAGCTTC 13893
Query 16903 CTTAATAATACTA-GCAACTCG-TTCCTCGGAC-GGTGTATGTTTAAGATGTTTAAACAT 16959
|||||| || ||| || || || | | ||| ||| || | ||| ||| |
Sbjct 13894 AACAATAATTCTTTGCA---CGATTTCTGGATCAGGTCTATTCTTTAAATGGGCAAATAA 13950
Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019
|| ||| || ||||| ||||||||| || ||||| || | ||| ||||| || ||
Sbjct 13951 CATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGT 14010
Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079
|| || ||||| ||||| |||||||||||| || |||| || || || ||| |||
Sbjct 14011 TAATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAA 14070
Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139
||| ||||| || | | ||||| || | ||||| ||| || || || || || |
Sbjct 14071 GAAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTATC 14130
Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199
||||||||| |||| | ||| || | || || || || | || ||
Sbjct 14131 GGCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGC 14190
Query 17200 CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTA 17259
| |||||| || ||| || | || | | ||| ||||| || | || ||
Sbjct 14191 ATCAAATAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAAAAGAGAATA 14250
Query 17260 CATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGC 17319
| ||| || || || | || || || || || || || || | ||||| |
Sbjct 14251 AACTTCAGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTTCAGG 14310
Query 17320 TATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379
| ||||||||| | |||| |||| ||| |||||| || || || || || ||
Sbjct 14311 AACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAGAAGC 14370
Query 17380 GGCGAAAAACGCCAATATATGCTTAATGAAATA------TTTTTCGTCCGGTGTAAGAAC 17433
|| || || || |||| | ||||||||| || || | | | | |
Sbjct 14371 AGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCT---ATT 14427
Query 17434 GCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCAC 17493
| ||| || | |||||| || || ||| | |||||| | |||||| || ||| |
Sbjct 14428 GTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTTC 14487
Query 17494 TGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATCT 17550
|| ||||||||||| | ||| || |||| ||| || ||||||| |||| ||||
Sbjct 14488 AGCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATATAACAAATCT 14544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517530203018400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |