Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq333 197 1e-45 >seq333 Length=169781 Score = 197 bits (218), Expect = 1e-45 Identities = 585/897 (65%), Gaps = 15/897 (2%) Strand=Plus/Plus Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722 |||||| |||||| |||||| ||| | ||||| || || ||||| || || ||| Sbjct 13654 AACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCTAA 13713 Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAG 16782 || |||||||||||||||||||| |||||||| | | ||| || | || | Sbjct 13714 GGAAATATTCTCCATGAAATCAAATGGATTAGTTACATTATATACCTTCTTATTACCAAA 13773 Query 16783 TTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCAT 16842 | | | ||||||||| |||||||| || | |||||| ||||||||| | ||||||| Sbjct 13774 AGCAACCAATAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGTTCAT 13833 Query 16843 TCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTC 16902 |||| | || || || | ||| || || ||| || | || ||| |||| ||||| Sbjct 13834 ACCTAACAAACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAGCTTC 13893 Query 16903 CTTAATAATACTA-GCAACTCG-TTCCTCGGAC-GGTGTATGTTTAAGATGTTTAAACAT 16959 |||||| || ||| || || || | | ||| ||| || | ||| ||| | Sbjct 13894 AACAATAATTCTTTGCA---CGATTTCTGGATCAGGTCTATTCTTTAAATGGGCAAATAA 13950 Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 || ||| || ||||| ||||||||| || ||||| || | ||| ||||| || || Sbjct 13951 CATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGT 14010 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 || || ||||| ||||| |||||||||||| || |||| || || || ||| ||| Sbjct 14011 TAATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAA 14070 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139 ||| ||||| || | | ||||| || | ||||| ||| || || || || || | Sbjct 14071 GAAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTATC 14130 Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199 ||||||||| |||| | ||| || | || || || || | || || Sbjct 14131 GGCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGC 14190 Query 17200 CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTA 17259 | |||||| || ||| || | || | | ||| ||||| || | || || Sbjct 14191 ATCAAATAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAAAAGAGAATA 14250 Query 17260 CATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGC 17319 | ||| || || || | || || || || || || || || | ||||| | Sbjct 14251 AACTTCAGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTTCAGG 14310 Query 17320 TATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379 | ||||||||| | |||| |||| ||| |||||| || || || || || || Sbjct 14311 AACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAGAAGC 14370 Query 17380 GGCGAAAAACGCCAATATATGCTTAATGAAATA------TTTTTCGTCCGGTGTAAGAAC 17433 || || || || |||| | ||||||||| || || | | | | | Sbjct 14371 AGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCT---ATT 14427 Query 17434 GCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCAC 17493 | ||| || | |||||| || || ||| | |||||| | |||||| || ||| | Sbjct 14428 GTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTTC 14487 Query 17494 TGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATCT 17550 || ||||||||||| | ||| || |||| ||| || ||||||| |||| |||| Sbjct 14488 AGCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATATAACAAATCT 14544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517530203018400