Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq333 228 8e-55 >seq333 Length=169781 Score = 228 bits (252), Expect = 8e-55 Identities = 590/889 (66%), Gaps = 19/889 (2%) Strand=Plus/Plus Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960 |||||| |||||| ||||| ||| | ||||| ||||| ||||| || || |||| Sbjct 13654 AACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCTAA 13713 Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAG-AGTACCCCA 16019 || ||||| ||||| |||||||| |||||||| | | ||| ||| | |||| | Sbjct 13714 GGAAATATTCTCCATGAAATCAAATGGATTAGTTACATTATATACCTTCTTATTACCAAA 13773 Query 16020 GTTCCGTAAC---TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAAT 16076 | ||| ||||||||| |||||||| || | ||||||||||||||| | | | Sbjct 13774 A----GCAACCAATAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGT 13829 Query 16077 TAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCG 16136 | || |||| | | || || | ||| | || ||| ||| | ||| || |||| | Sbjct 13830 TCATACCTAACAAACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAG 13889 Query 16137 CTTCTTTAATGATATCGGTGGCTCGTGTTTCAGAC--GGTGTATGGTTTAGGTGTTTAAA 16194 |||| ||| || || || | || || || ||| ||| |||| || ||| Sbjct 13890 CTTCAACAATAAT-TCTTTG-CACGATTTCTGGATCAGGTCTATTCTTTAAATGGGCAAA 13947 Query 16195 CATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAA 16254 | | ||| || || || ||||| |||||| ||||| || | ||| || || || Sbjct 13948 TAACATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAA 14007 Query 16255 AGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGA 16314 |||||| ||||||||| ||||| ||||||||||||||| |||| |||||| || || Sbjct 14008 AGTTAATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACT 14067 Query 16315 AAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTT 16374 |||||| ||||| |||| || ||||| || | ||||| ||| || || ||||| || Sbjct 14068 AAAGAAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTT 14127 Query 16375 ATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTAT 16434 || ||||||||| |||| | ||| || | ||||| || || | || Sbjct 14128 ATCGGCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAAT 14187 Query 16435 GGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACT 16494 || | ||| || || ||| ||| ||| | | ||| ||||| |||| | | Sbjct 14188 TGCATCAAATAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAAAAGAGA 14247 Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554 || | ||| || || || | || || || || || |||||||| | ||| || Sbjct 14248 ATAAACTTCAGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTTC 14307 Query 16555 CGCTATTTGTACTTC--CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCA 16612 | | ||| ||||| ||| ||| | |||| | | || ||||| || ||||| ||| Sbjct 14308 AGGAACTTGAACTTCAGCACAGAAATT--TTCCACTAAATTTTCATTAACTATACCATCA 14365 Query 16613 CTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCA-GATGTAA--GA 16669 |||||||| || || |||| | ||||||||| ||| | | || || | Sbjct 14366 GAAGCAGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTA 14425 Query 16670 ATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCC 16729 | | |||||| | |||||| || || ||| | |||||| | ||||| || ||| Sbjct 14426 TTGTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCT 14485 Query 16730 ACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATA 16778 | || ||||||||||||| ||| || |||| ||| || || |||| Sbjct 14486 TCAGCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATA 14534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511399185421600