Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq333 228 8e-55
>seq333
Length=169781
Score = 228 bits (252), Expect = 8e-55
Identities = 590/889 (66%), Gaps = 19/889 (2%)
Strand=Plus/Plus
Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960
|||||| |||||| ||||| ||| | ||||| ||||| ||||| || || ||||
Sbjct 13654 AACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCTAA 13713
Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAG-AGTACCCCA 16019
|| ||||| ||||| |||||||| |||||||| | | ||| ||| | |||| |
Sbjct 13714 GGAAATATTCTCCATGAAATCAAATGGATTAGTTACATTATATACCTTCTTATTACCAAA 13773
Query 16020 GTTCCGTAAC---TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAAT 16076
| ||| ||||||||| |||||||| || | ||||||||||||||| | | |
Sbjct 13774 A----GCAACCAATAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGT 13829
Query 16077 TAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCG 16136
| || |||| | | || || | ||| | || ||| ||| | ||| || |||| |
Sbjct 13830 TCATACCTAACAAACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAG 13889
Query 16137 CTTCTTTAATGATATCGGTGGCTCGTGTTTCAGAC--GGTGTATGGTTTAGGTGTTTAAA 16194
|||| ||| || || || | || || || ||| ||| |||| || |||
Sbjct 13890 CTTCAACAATAAT-TCTTTG-CACGATTTCTGGATCAGGTCTATTCTTTAAATGGGCAAA 13947
Query 16195 CATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAA 16254
| | ||| || || || ||||| |||||| ||||| || | ||| || || ||
Sbjct 13948 TAACATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAA 14007
Query 16255 AGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGA 16314
|||||| ||||||||| ||||| ||||||||||||||| |||| |||||| || ||
Sbjct 14008 AGTTAATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACT 14067
Query 16315 AAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTT 16374
|||||| ||||| |||| || ||||| || | ||||| ||| || || ||||| ||
Sbjct 14068 AAAGAAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTT 14127
Query 16375 ATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTAT 16434
|| ||||||||| |||| | ||| || | ||||| || || | ||
Sbjct 14128 ATCGGCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAAT 14187
Query 16435 GGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACT 16494
|| | ||| || || ||| ||| ||| | | ||| ||||| |||| | |
Sbjct 14188 TGCATCAAATAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAAAAGAGA 14247
Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554
|| | ||| || || || | || || || || || |||||||| | ||| ||
Sbjct 14248 ATAAACTTCAGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTTC 14307
Query 16555 CGCTATTTGTACTTC--CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCA 16612
| | ||| ||||| ||| ||| | |||| | | || ||||| || ||||| |||
Sbjct 14308 AGGAACTTGAACTTCAGCACAGAAATT--TTCCACTAAATTTTCATTAACTATACCATCA 14365
Query 16613 CTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCA-GATGTAA--GA 16669
|||||||| || || |||| | ||||||||| ||| | | || || |
Sbjct 14366 GAAGCAGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTA 14425
Query 16670 ATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCC 16729
| | |||||| | |||||| || || ||| | |||||| | ||||| || |||
Sbjct 14426 TTGTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCT 14485
Query 16730 ACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATA 16778
| || ||||||||||||| ||| || |||| ||| || || ||||
Sbjct 14486 TCAGCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATA 14534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511399185421600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |