Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1221 114 9e-21 >seq1221 Length=135038 Score = 114 bits (126), Expect = 9e-21 Identities = 394/615 (64%), Gaps = 36/615 (6%) Strand=Plus/Minus Query 101683 AGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGG 101742 ||| ||||| ||||| | ||| | |||||||| || | |||||| ||||| |||||| Sbjct 41076 AGCTTCAATATGATCCAAATAAACATGAGCATCACCCAAAGTATGAATAAATTCTCCACA 41017 Query 101743 CACTAGAT-TAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAA 101801 | | || || | | |||||||||||| |||||| | || ||| ||||||||| | Sbjct 41016 ATCCATATCTACT-ATATGAGCAATCATCTTAGTTAATAAAGCATATGAAGCAATGTTGA 40958 Query 101802 ATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGA----------- 101850 |||| || || || ||||||||| ||| || || || | | ||||| Sbjct 40957 ATGGTACCCCCAAGCCCATATCACATGACCTCTGGTATAATAAGCAGGATAATTTTGGTC 40898 Query 101851 ------AAG------CTTTCCAT-------CACAGACATAAAATTGACTTAATACATGAC 101891 ||| |||| | | ||||||||||||| || ||||||| Sbjct 40897 TAACTGAAGTATCGTCTTTGTTTTCTGGGAAATTTACATAAAATTGACAGAAAACATGAC 40838 Query 101892 AAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTC 101951 |||| || || ||||||| || || | |||||| ||| |||| | || || | Sbjct 40837 AAGGTGGTAAAGCCATTTTTTTAAAATCAGGTGGATTCCATGCAGACATAATAATTCTAC 40778 Query 101952 TATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTC 102011 ||| || ||||| |||| | | ||| | | | | || |||| || | | Sbjct 40777 GATCATATGGATTTGTCTTTAATTTTTTAATAACATCTGCAAGCTGATCAAACCCCTGAC 40718 Query 102012 CTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCAT 102071 | |||| || | || | || |||||| ||||||||||| ||||| || ||||||| Sbjct 40717 CAGTATAGTCACTATCACAATCTAGATATTCGGCTCCGAAATGTCTCCATTGGAATCCAT 40658 Query 102072 ACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATC 102131 | || ||||| | ||| |||||| | | | || || | |||||| |||||| | Sbjct 40657 AAACTGGTCCTAAATCACCTTCACGACGATGAGTTAATCCCAATTTATCCAAAAATTCAC 40598 Query 102132 TAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGA--TAGCTCTTTGCTGTCAGT 102189 || || ||| | ||||| || | || || || | | || ||| ||||| Sbjct 40597 GTGAACCGTTCCCCTCCCAGATTTTAACACC--CTTGTCACTTAATAGTTTAGCATCAGT 40540 Query 102190 AGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGT 102249 || || | |||||| || ||||| | || | ||| | | || ||||| || || Sbjct 40539 GGAACCAGAAACAAACCATAAAAGTTCATGAATTATACCCTTGGAGAAAACTCTTTTGGT 40480 Query 102250 AGTTAAAAGTGGAAA 102264 ||||||||||| || Sbjct 40479 GGTTAAAAGTGGGAA 40465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361240721457380