Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq1221 114 9e-21
>seq1221
Length=135038
Score = 114 bits (126), Expect = 9e-21
Identities = 394/615 (64%), Gaps = 36/615 (6%)
Strand=Plus/Minus
Query 101683 AGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGG 101742
||| ||||| ||||| | ||| | |||||||| || | |||||| ||||| ||||||
Sbjct 41076 AGCTTCAATATGATCCAAATAAACATGAGCATCACCCAAAGTATGAATAAATTCTCCACA 41017
Query 101743 CACTAGAT-TAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAA 101801
| | || || | | |||||||||||| |||||| | || ||| ||||||||| |
Sbjct 41016 ATCCATATCTACT-ATATGAGCAATCATCTTAGTTAATAAAGCATATGAAGCAATGTTGA 40958
Query 101802 ATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGA----------- 101850
|||| || || || ||||||||| ||| || || || | | |||||
Sbjct 40957 ATGGTACCCCCAAGCCCATATCACATGACCTCTGGTATAATAAGCAGGATAATTTTGGTC 40898
Query 101851 ------AAG------CTTTCCAT-------CACAGACATAAAATTGACTTAATACATGAC 101891
||| |||| | | ||||||||||||| || |||||||
Sbjct 40897 TAACTGAAGTATCGTCTTTGTTTTCTGGGAAATTTACATAAAATTGACAGAAAACATGAC 40838
Query 101892 AAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTC 101951
|||| || || ||||||| || || | |||||| ||| |||| | || || |
Sbjct 40837 AAGGTGGTAAAGCCATTTTTTTAAAATCAGGTGGATTCCATGCAGACATAATAATTCTAC 40778
Query 101952 TATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTC 102011
||| || ||||| |||| | | ||| | | | | || |||| || | |
Sbjct 40777 GATCATATGGATTTGTCTTTAATTTTTTAATAACATCTGCAAGCTGATCAAACCCCTGAC 40718
Query 102012 CTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCAT 102071
| |||| || | || | || |||||| ||||||||||| ||||| || |||||||
Sbjct 40717 CAGTATAGTCACTATCACAATCTAGATATTCGGCTCCGAAATGTCTCCATTGGAATCCAT 40658
Query 102072 ACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATC 102131
| || ||||| | ||| |||||| | | | || || | |||||| |||||| |
Sbjct 40657 AAACTGGTCCTAAATCACCTTCACGACGATGAGTTAATCCCAATTTATCCAAAAATTCAC 40598
Query 102132 TAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGA--TAGCTCTTTGCTGTCAGT 102189
|| || ||| | ||||| || | || || || | | || ||| |||||
Sbjct 40597 GTGAACCGTTCCCCTCCCAGATTTTAACACC--CTTGTCACTTAATAGTTTAGCATCAGT 40540
Query 102190 AGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGT 102249
|| || | |||||| || ||||| | || | ||| | | || ||||| || ||
Sbjct 40539 GGAACCAGAAACAAACCATAAAAGTTCATGAATTATACCCTTGGAGAAAACTCTTTTGGT 40480
Query 102250 AGTTAAAAGTGGAAA 102264
||||||||||| ||
Sbjct 40479 GGTTAAAAGTGGGAA 40465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361240721457380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |