Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq221 100 2e-16
seq1836 86.0 5e-12
>seq221
Length=38424
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
||||||||||| ||| | || || || || || || |||||||| ||| ||| ||
Sbjct 37883 AAAATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTGGAAGTCGAATCC 37824
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || || | | || | || || ||| ||||| |||||| | || |||
Sbjct 37823 TCCGACACCATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCACCTGAT 37764
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
||||||||| | |||||||| || |||||| |||||||| | ||| | ||||||
Sbjct 37763 CAACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACCTTAAGTGATTAC 37704
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||| || || ||||||||| | || |||| || ||||| |||| ||
Sbjct 37703 AATATCCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGG 37654
>seq1836
Length=79629
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
|||||||| ||| | || || || || || || || |||||| ||| ||| | |
Sbjct 57117 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57058
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | | || |||| || || || || |||||| | || || |||
Sbjct 57057 GACACCATTGACAATGTTAAATCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 56998
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|||||| | || ||||| || || ||| | ||||| | |||| | | |||||||||
Sbjct 56997 CAAAGATTAATTTTTGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGATTACAAT 56938
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| || |||||||||||| | ||| |||| ||| |||| |||| ||
Sbjct 56937 ATCCAAAAGGAATCTACTTTACACTTGGTTTTAAGATTGAGAGGTGG 56891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428323575578900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |