Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq1221 136 3e-27
>seq1221
Length=135038
Score = 136 bits (150), Expect = 3e-27
Identities = 294/443 (66%), Gaps = 34/443 (8%)
Strand=Plus/Minus
Query 97047 AGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGG 97106
||| ||||| |||| || ||||| |||||||| || ||||| |||||||||||||||
Sbjct 41076 AGCTTCAATATGATCCAAATAAACATGAGCATCACCCAAAGTATGAATAAATTCTCCACA 41017
Query 97107 AACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAA 97166
| | | ||| | ||| || ||||| |||||||| || ||| ||||||||| ||
Sbjct 41016 ATCCATATCTACTATATGAGCAATCATCTTAGTTAATAAAGCATATGAAGCAATGTTGAA 40957
Query 97167 AGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGA------------ 97214
|| ||||| | ||||||||| ||| || || ||||| |||||
Sbjct 40956 TGGTACCCCCAAGCCCATATCACATGACCTCTGGTATAATAAGCAGGATAATTTTGGTCT 40897
Query 97215 -----AAG------CTTTCCAT-------CACACACATAAAACTGACTCAATACATGACA 97256
||| |||| | | |||||||| |||| || ||||||||
Sbjct 40896 AACTGAAGTATCGTCTTTGTTTTCTGGGAAATTTACATAAAATTGACAGAAAACATGACA 40837
Query 97257 GGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCT 97316
|| || || ||||||||| || ||| |||||| ||| |||| | ||||| |
Sbjct 40836 AGGTGGTAAAGCCATTTTTTTAAAATCAGGTGGATTCCATGCAGACATAATAATTCTACG 40777
Query 97317 ATCGGTTGGGTTTGTGTGTATGGTATTAAT--TATCTGCTTTAATTGATCAACGCCTTCT 97374
||| ||| ||||| | || | ||||| |||||| | ||||||| || |
Sbjct 40776 ATCATATGGATTTGTCTTTAATTTTTTAATAACATCTGC--AAGCTGATCAAACCCCTGA 40719
Query 97375 CCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCA 97434
||| ||| | | | | || ||||||| ||||| ||||| |||||||||||||||
Sbjct 40718 CCAGTATAGTCACTATCACAATCTAGATATTCGGCTCCGAAATGTCTCCATTGGAATCCA 40659
Query 97435 TAAACAGGTCCAAGGTCTCCTTC 97457
||||| ||||| | || |||||
Sbjct 40658 TAAACTGGTCCTAAATCACCTTC 40636
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346773941096600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |