Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1221 136 3e-27 >seq1221 Length=135038 Score = 136 bits (150), Expect = 3e-27 Identities = 294/443 (66%), Gaps = 34/443 (8%) Strand=Plus/Minus Query 97047 AGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGG 97106 ||| ||||| |||| || ||||| |||||||| || ||||| ||||||||||||||| Sbjct 41076 AGCTTCAATATGATCCAAATAAACATGAGCATCACCCAAAGTATGAATAAATTCTCCACA 41017 Query 97107 AACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAA 97166 | | | ||| | ||| || ||||| |||||||| || ||| ||||||||| || Sbjct 41016 ATCCATATCTACTATATGAGCAATCATCTTAGTTAATAAAGCATATGAAGCAATGTTGAA 40957 Query 97167 AGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGA------------ 97214 || ||||| | ||||||||| ||| || || ||||| ||||| Sbjct 40956 TGGTACCCCCAAGCCCATATCACATGACCTCTGGTATAATAAGCAGGATAATTTTGGTCT 40897 Query 97215 -----AAG------CTTTCCAT-------CACACACATAAAACTGACTCAATACATGACA 97256 ||| |||| | | |||||||| |||| || |||||||| Sbjct 40896 AACTGAAGTATCGTCTTTGTTTTCTGGGAAATTTACATAAAATTGACAGAAAACATGACA 40837 Query 97257 GGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCT 97316 || || || ||||||||| || ||| |||||| ||| |||| | ||||| | Sbjct 40836 AGGTGGTAAAGCCATTTTTTTAAAATCAGGTGGATTCCATGCAGACATAATAATTCTACG 40777 Query 97317 ATCGGTTGGGTTTGTGTGTATGGTATTAAT--TATCTGCTTTAATTGATCAACGCCTTCT 97374 ||| ||| ||||| | || | ||||| |||||| | ||||||| || | Sbjct 40776 ATCATATGGATTTGTCTTTAATTTTTTAATAACATCTGC--AAGCTGATCAAACCCCTGA 40719 Query 97375 CCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCA 97434 ||| ||| | | | | || ||||||| ||||| ||||| ||||||||||||||| Sbjct 40718 CCAGTATAGTCACTATCACAATCTAGATATTCGGCTCCGAAATGTCTCCATTGGAATCCA 40659 Query 97435 TAAACAGGTCCAAGGTCTCCTTC 97457 ||||| ||||| | || ||||| Sbjct 40658 TAAACTGGTCCTAAATCACCTTC 40636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346773941096600