Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq221 167 4e-36 seq1221 138 2e-27 >seq221 Length=38424 Score = 167 bits (184), Expect = 4e-36 Identities = 179/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | ||||| |||| || || || || ||| | || | ||| | Sbjct 37881 AATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTGGAAGTCGAATCCTC 37822 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| |||| | ||| || ||||||||||| |||||||| ||||||||||| Sbjct 37821 CGACACCATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCACCTGATCA 37762 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | || ||||| || |||||||| || ||| || |||| ||| ||||| || Sbjct 37761 ACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACCTTAAGTGATTACAA 37702 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 ||| ||||||||||| ||||| ||||||||||| | ||| |||||||| ||| || Sbjct 37701 TATCCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGGTGGTAAGAA 37645 >seq1221 Length=135038 Score = 138 bits (152), Expect = 2e-27 Identities = 307/459 (67%), Gaps = 35/459 (8%) Strand=Plus/Minus Query 205360 AATTGtttttttAATCCATTAATATGATTAACATATATATGTGCATTACCAATATTATGA 205419 ||||||| || ||| | | |||||||| | ||| | ||| |||| ||| | | ||||| Sbjct 41090 AATTGTTCTTGTAAAGCTTCAATATGATCCAAATAAACATGAGCATCACCCAAAGTATGA 41031 Query 205420 ATAAATTCATATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAA 205479 |||||||| | | || || ||| |||||||| | ||| |||||| ||| Sbjct 41030 ATAAATTCTCCACAATCCATATCTACTATATGAGCAATCATCTTAGTTAATAAAGCATAT 40971 Query 205480 CTAGCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGATACA-------- 205531 ||||| || |||||||| || || ||||||||| ||| || || || | Sbjct 40970 GAAGCAATGTTGAATGGTACCCCCAAGCCCATATCACATGACCTCTGGTATAATAAGCAG 40911 Query 205532 ------TTTG-----AC--ATGTAAGATATTTATTATT------AATTACATGAAATTGT 205572 |||| || | ||| | ||| || | | |||||| |||||| Sbjct 40910 GATAATTTTGGTCTAACTGAAGTATCGTCTTTGTTTTCTGGGAAATTTACATAAAATTGA 40851 Query 205573 -ACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGGCTGT 205631 | |||||| ||||||||||||| | |||| |||| || ||| |||||||| || | Sbjct 40850 CAGAAAACA-TGACAAGGTGGTAAAGCCATTTTTTTAAAATCAGGTGGATTCCATGCAG- 40793 Query 205632 TAATATTATATTTCTAGATTCAGGtttattt---tttattttatttatAATATGTGTTAA 205688 | || ||| ||||| ||| | |||| |||| ||| || |||| || || | Sbjct 40792 --ACATAATAATTCTACGATCATATGGATTTGTCTTTAATTTTTTAATAACATCTGCAAG 40735 Query 205689 TTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCACCAAAATG 205748 |||||||| || ||| ||||| | |||| ||| | ||||| || || ||||| Sbjct 40734 CTGATCAAACCCCTGACCAGTATAGTCACTATCACAATCTAGATATTCGGCTCCGAAATG 40675 Query 205749 ACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTC 205787 | |||||| || ||||||||||| |||||||||||||| Sbjct 40674 TCTCCATTGGAATCCATAAACTGGTCCTAAATCACCTTC 40636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755433525184000