Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq221 167 4e-36
seq1221 138 2e-27
>seq221
Length=38424
Score = 167 bits (184), Expect = 4e-36
Identities = 179/237 (76%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| || | ||||| |||| || || || || ||| | || | ||| |
Sbjct 37881 AATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTGGAAGTCGAATCCTC 37822
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| |||| | ||| || ||||||||||| |||||||| |||||||||||
Sbjct 37821 CGACACCATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCACCTGATCA 37762
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||||| | || ||||| || |||||||| || ||| || |||| ||| ||||| ||
Sbjct 37761 ACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACCTTAAGTGATTACAA 37702
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774
||| ||||||||||| ||||| ||||||||||| | ||| |||||||| ||| ||
Sbjct 37701 TATCCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGGTGGTAAGAA 37645
>seq1221
Length=135038
Score = 138 bits (152), Expect = 2e-27
Identities = 307/459 (67%), Gaps = 35/459 (8%)
Strand=Plus/Minus
Query 205360 AATTGtttttttAATCCATTAATATGATTAACATATATATGTGCATTACCAATATTATGA 205419
||||||| || ||| | | |||||||| | ||| | ||| |||| ||| | | |||||
Sbjct 41090 AATTGTTCTTGTAAAGCTTCAATATGATCCAAATAAACATGAGCATCACCCAAAGTATGA 41031
Query 205420 ATAAATTCATATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAA 205479
|||||||| | | || || ||| |||||||| | ||| |||||| |||
Sbjct 41030 ATAAATTCTCCACAATCCATATCTACTATATGAGCAATCATCTTAGTTAATAAAGCATAT 40971
Query 205480 CTAGCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGATACA-------- 205531
||||| || |||||||| || || ||||||||| ||| || || || |
Sbjct 40970 GAAGCAATGTTGAATGGTACCCCCAAGCCCATATCACATGACCTCTGGTATAATAAGCAG 40911
Query 205532 ------TTTG-----AC--ATGTAAGATATTTATTATT------AATTACATGAAATTGT 205572
|||| || | ||| | ||| || | | |||||| ||||||
Sbjct 40910 GATAATTTTGGTCTAACTGAAGTATCGTCTTTGTTTTCTGGGAAATTTACATAAAATTGA 40851
Query 205573 -ACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGGCTGT 205631
| |||||| ||||||||||||| | |||| |||| || ||| |||||||| || |
Sbjct 40850 CAGAAAACA-TGACAAGGTGGTAAAGCCATTTTTTTAAAATCAGGTGGATTCCATGCAG- 40793
Query 205632 TAATATTATATTTCTAGATTCAGGtttattt---tttattttatttatAATATGTGTTAA 205688
| || ||| ||||| ||| | |||| |||| ||| || |||| || || |
Sbjct 40792 --ACATAATAATTCTACGATCATATGGATTTGTCTTTAATTTTTTAATAACATCTGCAAG 40735
Query 205689 TTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCACCAAAATG 205748
|||||||| || ||| ||||| | |||| ||| | ||||| || || |||||
Sbjct 40734 CTGATCAAACCCCTGACCAGTATAGTCACTATCACAATCTAGATATTCGGCTCCGAAATG 40675
Query 205749 ACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTC 205787
| |||||| || ||||||||||| ||||||||||||||
Sbjct 40674 TCTCCATTGGAATCCATAAACTGGTCCTAAATCACCTTC 40636
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755433525184000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |