Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq333 284 1e-71
>seq333
Length=169781
Score = 284 bits (314), Expect = 1e-71
Identities = 585/858 (68%), Gaps = 19/858 (2%)
Strand=Plus/Plus
Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004
||||||| || ||||||||||||||||||||| || || || |||| |||||||| |
Sbjct 13665 TTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCTAAGGAAATATTCT 13724
Query 16005 CCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATC-CCAATTCCAAC-AA 16062
|||| |||||||| ||||| || | ||| || | || || |||| |||| ||
Sbjct 13725 CCATGAAATCAAATGGATTAGTTACATTATA-TACCT-TCTTATTACCAAAAGCAACCAA 13782
Query 16063 TAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAA 16122
||||||||| || ||||| || | ||| || |||||| | ||||||| |||| ||
Sbjct 13783 TAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGTTCATACCTAACAA 13842
Query 16123 TTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTAT 16182
|||| || | || || || ||| | | ||||| ||| ||| ||||||| || ||
Sbjct 13843 ACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAGCTTCAACAATAAT 13902
Query 16183 ATCTCTTACTACACTATTTAACGGAG--GGTTTAAT----AAGTGTTTAAACATTATACA 16236
|||| | ||| |||| ||| ||| || | || || ||| | |||||
Sbjct 13903 ---TCTT--TGCACGATTTCT-GGATCAGGTCTATTCTTTAAATGGGCAAATAACATACA 13956
Query 16237 AGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACC 16296
|||||||||| ||| |||||||| || || ||||| || || || || || | ||
Sbjct 13957 AGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGTTAATCC 14016
Query 16297 TGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATAT 16356
|||||||| ||||| ||| || | ||| || || | ||||| || ||| |||||| ||
Sbjct 14017 TGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAAGAAAAT 14076
Query 16357 ACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctat 16416
|||||||| || ||||| ||||| |||| ||| | || || ||| | ||
Sbjct 14077 ACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTATCGGCGAT 14136
Query 16417 ccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAA 16476
|||||| |||||| || || || | || ||| || | | ||||||| |||
Sbjct 14137 CCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGCATCAAA 14196
Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536
|||| | | ||||| ||| || |||||||||||| | | | ||| | |||
Sbjct 14197 TAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAAAAGAGAATAAACTTC 14256
Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596
|||||||| | || || || || |||||||| || | ||||||| | | |||
Sbjct 14257 AGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTTCAGGAACTTG 14316
Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656
||||||| | || |||| |||| ||||| |||||||| ||||| ||| |||||
Sbjct 14317 AACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAGAAGCAGCAAA 14376
Query 16657 AAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAAGT-TTTAACCAGTC 16713
|| || | || | ||| |||| ||| ||||| | || | || ||| ||
Sbjct 14377 GAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTATTGTTCCAATC 14436
Query 16714 AGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTT 16773
||||| || |||||||| ||||| | ||||| || ||||| |||| |||||
Sbjct 14437 GTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTTCAGCTTTTTT 14496
Query 16774 ATACATTTTCCATATGTC 16791
|||||||| |||||| ||
Sbjct 14497 ATACATTTGCCATATTTC 14514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462498240268000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |