Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq333 284 1e-71 >seq333 Length=169781 Score = 284 bits (314), Expect = 1e-71 Identities = 585/858 (68%), Gaps = 19/858 (2%) Strand=Plus/Plus Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004 ||||||| || ||||||||||||||||||||| || || || |||| |||||||| | Sbjct 13665 TTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCTAAGGAAATATTCT 13724 Query 16005 CCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATC-CCAATTCCAAC-AA 16062 |||| |||||||| ||||| || | ||| || | || || |||| |||| || Sbjct 13725 CCATGAAATCAAATGGATTAGTTACATTATA-TACCT-TCTTATTACCAAAAGCAACCAA 13782 Query 16063 TAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAA 16122 ||||||||| || ||||| || | ||| || |||||| | ||||||| |||| || Sbjct 13783 TAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGTTCATACCTAACAA 13842 Query 16123 TTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTAT 16182 |||| || | || || || ||| | | ||||| ||| ||| ||||||| || || Sbjct 13843 ACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAGCTTCAACAATAAT 13902 Query 16183 ATCTCTTACTACACTATTTAACGGAG--GGTTTAAT----AAGTGTTTAAACATTATACA 16236 |||| | ||| |||| ||| ||| || | || || ||| | ||||| Sbjct 13903 ---TCTT--TGCACGATTTCT-GGATCAGGTCTATTCTTTAAATGGGCAAATAACATACA 13956 Query 16237 AGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACC 16296 |||||||||| ||| |||||||| || || ||||| || || || || || | || Sbjct 13957 AGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGTTAATCC 14016 Query 16297 TGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATAT 16356 |||||||| ||||| ||| || | ||| || || | ||||| || ||| |||||| || Sbjct 14017 TGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAAGAAAAT 14076 Query 16357 ACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctat 16416 |||||||| || ||||| ||||| |||| ||| | || || ||| | || Sbjct 14077 ACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTATCGGCGAT 14136 Query 16417 ccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAA 16476 |||||| |||||| || || || | || ||| || | | ||||||| ||| Sbjct 14137 CCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGCATCAAA 14196 Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536 |||| | | ||||| ||| || |||||||||||| | | | ||| | ||| Sbjct 14197 TAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAAAAGAGAATAAACTTC 14256 Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596 |||||||| | || || || || |||||||| || | ||||||| | | ||| Sbjct 14257 AGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTTCAGGAACTTG 14316 Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656 ||||||| | || |||| |||| ||||| |||||||| ||||| ||| ||||| Sbjct 14317 AACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAGAAGCAGCAAA 14376 Query 16657 AAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAAGT-TTTAACCAGTC 16713 || || | || | ||| |||| ||| ||||| | || | || ||| || Sbjct 14377 GAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTATTGTTCCAATC 14436 Query 16714 AGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTT 16773 ||||| || |||||||| ||||| | ||||| || ||||| |||| ||||| Sbjct 14437 GTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTTCAGCTTTTTT 14496 Query 16774 ATACATTTTCCATATGTC 16791 |||||||| |||||| || Sbjct 14497 ATACATTTGCCATATTTC 14514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462498240268000