Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1221 82.4 6e-11 >seq1221 Length=135038 Score = 82.4 bits (90), Expect = 6e-11 Identities = 160/234 (68%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 20209 CGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAA 20268 |||| || || ||||| || || || |||||||| |||||||||||||| ||||| ||| Sbjct 40630 CGTCGTGAAGGTGATTTAGGACCAGTTTATGGATTCCAATGGAGACATTTCGGAGCCGAA 40689 Query 20269 TATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATT 20328 ||| | || | | | ||| ||| || || | ||||| | | |||||||| Sbjct 40690 TATCTAGATTGTGATAGTGACTATACTGGTCAGGGGTTTGATCAGCTTGCAGATGTTATT 40749 Query 20329 AATTTAATTAAA-ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAA 20387 || ||||||| || || ||| | || | ||||||||| | | || ||||| | Sbjct 40750 AA-AAAATTAAAGACAAATCCATATGATCGTAGAATTATTATGTCTGCATGGAATCCACC 40808 Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGT 20441 ||| | ||||||||| || || |||||| | | || |||||||| || Sbjct 40809 TGATTTTAAAAAAATGGCTTTACCACCTTGTCATGTTTTCTGTCAATTTTATGT 40862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399172421169100