Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq333 304 1e-77 >seq333 Length=169781 Score = 304 bits (336), Expect = 1e-77 Identities = 612/899 (68%), Gaps = 13/899 (1%) Strand=Plus/Plus Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960 ||||| || | ||||||| || |||||| ||||||||||| ||||| || || | Sbjct 13652 ATAACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCT 13711 Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACC 14019 | || ||||| ||||| |||||||||||||| ||| |||| | | || || | | ||| Sbjct 13712 AAGGAAATATTCTCCATGAAATCAAATGGATTAGTT-ACATTATATACCTTCTTATTACC 13770 Query 14020 TAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATT 14079 | | | | ||||||||| || | ||||||| ||||||| ||||||| | | || Sbjct 13771 AAAAGCAACCAATAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGTT 13830 Query 14080 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 14139 |||||||| | | || || | || || ||| |||| ||||| |||| ||||| Sbjct 13831 CATACCTAACAAACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAGC 13890 Query 14140 CTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 14199 || ||||| | | ||||| | ||| || |||| ||| ||| | Sbjct 13891 TTCAACAATAATTCTTTGCACGATTTCTGGATCAGGTCTATTCTTTAAATGGGCAAATAA 13950 Query 14200 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 14259 | ||| ||||||||| ||| | || |||||||| ||| | ||| || || || || Sbjct 13951 CATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGT 14010 Query 14260 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 14319 |||||||||||| ||||||| ||| |||||||| || || | ||| || ||||| ||| Sbjct 14011 TAATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAA 14070 Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14379 ||| || || |||| |||||||| || | ||||| ||| || | | || | || | Sbjct 14071 GAAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTATC 14130 Query 14380 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14439 | |||||||| |||||| | | || || |||| | || || | ||| || Sbjct 14131 GGCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGC 14190 Query 14440 ATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAAT--GTATGTATCAATAAGTAAGC 14495 || ||||||| ||| |||| || | ||| | || |||| |||||| ||| || Sbjct 14191 ATCAAATAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAA-AAG--AG- 14246 Query 14496 TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTT 14555 ||| | |||||| || || |||| || || || |||||||| || | |||||| Sbjct 14247 AATAAACTTCAGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTT 14306 Query 14556 CTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCAC 14615 | | ||| || || | | || |||| | |||||||||||||||||||||||| Sbjct 14307 CAGGAACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAG 14366 Query 14616 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGT---T 14672 ||| ||||| || || |||| ||| || || | || | || | | | | Sbjct 14367 AAGCAGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTAT 14426 Query 14673 TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAA 14732 | ||||||||| |||||||||| | ||| | ||| ||| | ||||| || ||| Sbjct 14427 TGTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTT 14486 Query 14733 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTT 14791 ||||||||||||||||| ||||||||| | |||| || || || | ||||||||| Sbjct 14487 CAGCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATATAACAAATCTT 14545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482331250218400