Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq333 154 1e-32
seq1836 93.3 4e-14
seq221 93.3 4e-14
seq481 82.4 7e-11
>seq333
Length=169781
Score = 154 bits (170), Expect = 1e-32
Identities = 420/641 (66%), Gaps = 4/641 (1%)
Strand=Plus/Plus
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
|||||| ||| |||| || | |||||| ||||||| || ||| | || | || |
Sbjct 50653 TTCAACTCGTTTCATGAATAAATCCGGAATCCATAACGCCGGGAATAAATCTCTAGCTCT 50712
Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460
| || || || |||| || ||| | | ||| | || || || | |||||||||||
Sbjct 50713 AATTTCTTCCTTACCGGAATTTTTTCTAATATCAATGAAATCAAAAATATCCGCATGCCA 50772
Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520
|| || | |||| |||||| || || |||||||| || || || ||||| || |||||
Sbjct 50773 AGGTTCTAAATAAAGGGCAAAAGCTCCTGGTCTCTTGTTACCACCTTGATCAACATAACG 50832
Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580
|||||||||||| | ||||| | ||| || | | ||||||||| | || ||
Sbjct 50833 AGCCGTGTTGTTGAAAACTCTAACCATGGGGATAATACCGTTGGAAGTACCATTGGTACC 50892
Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|| | | ||||| | || || | || |||| || || || || || || |
Sbjct 50893 AGCAATATAAGAACCAGTGGCCCGGATATTATGAATATGTAACCCAATACCACCAGCACT 50952
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
|| || || | || || || | |||||||| || || || ||| || || ||
Sbjct 50953 CTTGGAAATTAAAGCACACGTCTTTAACGTGTCGTAAATACCATCAATGGAATCTTCCTT 51012
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| || ||||||||||||||||||||||| | | || ||| | || ||| | ||
Sbjct 51013 CATAGCAACCAAGAAACACGAAGACATTTGTGGACTTGGAGTACCAGCATTGAATAACGT 51072
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
||| | || ||||||||| | ||||||| ||| || | || || |
Sbjct 51073 GGGGGACCCATGGGTAAAGTATTTTTGAGACATTAAATTATATGATTCAATTACTCGGGG 51132
Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC--G 23878
||| || || || || ||||| || || || | ||| | | | ||||||||| ||
Sbjct 51133 AATATCTTCACCATGAATACCAATAGCAACTCTCATAAGTAAATGTTGAGGTCTTTCAGC 51192
Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938
| | | | || |||| |||| ||| || | || || ||||| || |||||||||
Sbjct 51193 AACTTTA--CCATTAACACGTAACAAATAAGATCTTTCCAAGGTTTTGAAACCAAAATAG 51250
Query 23939 TCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
| || | || |||||||| | || || | ||||| ||
Sbjct 51251 TTGTAACTGAAATCACGATCATAAACAATAGTTGAATTTAA 51291
>seq1836
Length=79629
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||| | || || || || || ||| | || |||||| | ||
Sbjct 57345 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57286
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | ||| ||||||||||| | || || |||||
Sbjct 57285 GACACTATTGACAACGTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAA 57226
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || || || || ||||| |||||| || ||| | || || |||
Sbjct 57225 CAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACAAC 57166
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| ||||| ||| | || |||| | ||| |||| || ||||
Sbjct 57165 ATCCAAAAGGAATCCACTTTACACTTGGTTTTGAGATTGAGAGGTGGTA 57117
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||| | || || || || || ||| | || |||||| | ||
Sbjct 57117 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57058
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || ||| | || ||||||||||| | || || |||||
Sbjct 57057 GACACCATTGACAATGTTAAATCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 56998
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | |||| || ||||| || || || |||||| || ||| | ||||| ||
Sbjct 56997 CAAAGATTAATTTTTGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGATTACAAT 56938
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| ||||| ||||| ||| | || |||| | ||| |||| || |||
Sbjct 56937 ATCCAAAAGGAATCTACTTTACACTTGGTTTTAAGATTGAGAGGTGGT 56890
>seq221
Length=38424
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| ||||| | || || || || || || | || || ||| |
Sbjct 37883 AAAATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTGGAAGTCGAATCC 37824
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| | || | |||||| | || || |||||||| | || || ||
Sbjct 37823 TCCGACACCATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCACCTGAT 37764
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | |||| || ||||| ||||| |||||||| || || | || |||||
Sbjct 37763 CAACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACCTTAAGTGATTAC 37704
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| || ||||||||||| ||| | ||| |||| | ||| | || || |||
Sbjct 37703 AATATCCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGGT 37653
>seq481
Length=384
Score = 82.4 bits (90), Expect = 7e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||| | || || || || || ||| | || |||||| | ||
Sbjct 208 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 149
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | ||| ||||||||||| | || || |||||
Sbjct 148 GACACTATTGACAACGTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 89
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || || || || ||||| |||||| || ||| | || || |||
Sbjct 88 CAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACAAC 29
Query 31373 ATTCAAAAAGAATCGACT 31390
|| ||||| ||||| |||
Sbjct 28 ATCCAAAAGGAATCCACT 11
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445753138449600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |