Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq333 154 1e-32 seq1836 93.3 4e-14 seq221 93.3 4e-14 seq481 82.4 7e-11 >seq333 Length=169781 Score = 154 bits (170), Expect = 1e-32 Identities = 420/641 (66%), Gaps = 4/641 (1%) Strand=Plus/Plus Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 |||||| ||| |||| || | |||||| ||||||| || ||| | || | || | Sbjct 50653 TTCAACTCGTTTCATGAATAAATCCGGAATCCATAACGCCGGGAATAAATCTCTAGCTCT 50712 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 | || || || |||| || ||| | | ||| | || || || | ||||||||||| Sbjct 50713 AATTTCTTCCTTACCGGAATTTTTTCTAATATCAATGAAATCAAAAATATCCGCATGCCA 50772 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 || || | |||| |||||| || || |||||||| || || || ||||| || ||||| Sbjct 50773 AGGTTCTAAATAAAGGGCAAAAGCTCCTGGTCTCTTGTTACCACCTTGATCAACATAACG 50832 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 |||||||||||| | ||||| | ||| || | | ||||||||| | || || Sbjct 50833 AGCCGTGTTGTTGAAAACTCTAACCATGGGGATAATACCGTTGGAAGTACCATTGGTACC 50892 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | | ||||| | || || | || |||| || || || || || || | Sbjct 50893 AGCAATATAAGAACCAGTGGCCCGGATATTATGAATATGTAACCCAATACCACCAGCACT 50952 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || || | || || || | |||||||| || || || ||| || || || Sbjct 50953 CTTGGAAATTAAAGCACACGTCTTTAACGTGTCGTAAATACCATCAATGGAATCTTCCTT 51012 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | || ||||||||||||||||||||||| | | || ||| | || ||| | || Sbjct 51013 CATAGCAACCAAGAAACACGAAGACATTTGTGGACTTGGAGTACCAGCATTGAATAACGT 51072 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 ||| | || ||||||||| | ||||||| ||| || | || || | Sbjct 51073 GGGGGACCCATGGGTAAAGTATTTTTGAGACATTAAATTATATGATTCAATTACTCGGGG 51132 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC--G 23878 ||| || || || || ||||| || || || | ||| | | | ||||||||| || Sbjct 51133 AATATCTTCACCATGAATACCAATAGCAACTCTCATAAGTAAATGTTGAGGTCTTTCAGC 51192 Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938 | | | | || |||| |||| ||| || | || || ||||| || ||||||||| Sbjct 51193 AACTTTA--CCATTAACACGTAACAAATAAGATCTTTCCAAGGTTTTGAAACCAAAATAG 51250 Query 23939 TCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 | || | || |||||||| | || || | ||||| || Sbjct 51251 TTGTAACTGAAATCACGATCATAAACAATAGTTGAATTTAA 51291 >seq1836 Length=79629 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||| | || || || || || ||| | || |||||| | || Sbjct 57345 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57286 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | ||||| | ||| ||||||||||| | || || ||||| Sbjct 57285 GACACTATTGACAACGTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAA 57226 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || || || || ||||| |||||| || ||| | || || ||| Sbjct 57225 CAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACAAC 57166 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| ||||| ||| | || |||| | ||| |||| || |||| Sbjct 57165 ATCCAAAAGGAATCCACTTTACACTTGGTTTTGAGATTGAGAGGTGGTA 57117 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||| | || || || || || ||| | || |||||| | || Sbjct 57117 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57058 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| | || ||||||||||| | || || ||||| Sbjct 57057 GACACCATTGACAATGTTAAATCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 56998 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | |||| || ||||| || || || |||||| || ||| | ||||| || Sbjct 56997 CAAAGATTAATTTTTGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGATTACAAT 56938 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || ||||| ||||| ||| | || |||| | ||| |||| || ||| Sbjct 56937 ATCCAAAAGGAATCTACTTTACACTTGGTTTTAAGATTGAGAGGTGGT 56890 >seq221 Length=38424 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||||||||| ||||| | || || || || || || | || || ||| | Sbjct 37883 AAAATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTGGAAGTCGAATCC 37824 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| | || | |||||| | || || |||||||| | || || || Sbjct 37823 TCCGACACCATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCACCTGAT 37764 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || | |||| || ||||| ||||| |||||||| || || | || ||||| Sbjct 37763 CAACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACCTTAAGTGATTAC 37704 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || || ||||||||||| ||| | ||| |||| | ||| | || || ||| Sbjct 37703 AATATCCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGGT 37653 >seq481 Length=384 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||| | || || || || || ||| | || |||||| | || Sbjct 208 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 149 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | ||||| | ||| ||||||||||| | || || ||||| Sbjct 148 GACACTATTGACAACGTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 89 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || || || || ||||| |||||| || ||| | || || ||| Sbjct 88 CAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACAAC 29 Query 31373 ATTCAAAAAGAATCGACT 31390 || ||||| ||||| ||| Sbjct 28 ATCCAAAAGGAATCCACT 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445753138449600