Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq333 132 1e-25 seq1891 86.0 1e-11 seq1221 84.2 4e-11 >seq333 Length=169781 Score = 132 bits (146), Expect = 1e-25 Identities = 297/441 (67%), Gaps = 9/441 (2%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||||||||| ||||||| || ||||||||||| | || || || ||||||||| Sbjct 14100 GTTGCCTTTGCTGCTATTGAAGGTATTTTCTTTAGTGGATCCTTTGCTTCGATTTTCTGG 14041 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| || || | |||| || | || | ||| ||||| || ||||| || || Sbjct 14040 TTAAAGAAAAGAGGATTAATGCCAGGATTAACTTTCTCTAATGAATTAATTTCAAGAGAT 13981 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTT--TGTTGATACCC 102095 ||||| | ||| || ||||| || ||| | || | ||| | | ||| Sbjct 13980 GAAGGATTACATACTGATTTTGCTTGTATGTTATTTGCCCA---TTTAAAGAATAGACCT 13924 Query 102096 CATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTC 102155 ||| ||||| | | |||| | |||||| || |||||| | |||| | Sbjct 13923 GATC--CAGAAATCGTGCAAAGAATTATTGTTGAAGCTGTTGCTATTGAAAAGGAATATT 13866 Query 102156 TCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACA 102215 |||| | | | | || |||| || | || ||||||| || ||| | || || Sbjct 13865 TCACTGATGCTTTACCAGTTAGTTTGTTAGGTATGAACTCGGGATTAATGTGTCAATATG 13806 Query 102216 TTGAATTTGTGGCAGATAAACTATTGGTTG-AAATGGGACTAGAAAAGCACTATAATGTT 102274 |||| ||||| || |||| | ||||||||| ||| | || | ||| |||||||| Sbjct 13805 TTGAGTTTGTAGCTGATAGATTATTGGTTGCTTTTGGTAATA-AGAAGGTATATAATGTA 13747 Query 102275 ACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAA 102334 || || || || |||||||| ||||||||| | | ||||| || || |||||| Sbjct 13746 ACTAATCCATTTGATTTCATGGAGAATATTTCCTTAGCTGGGAAGACTAATTTCTTTGAA 13687 Query 102335 AAGAGAGTCGCCGAGTATCAA 102355 |||||||| |||| |||||| Sbjct 13686 AAGAGAGTTTCCGATTATCAA 13666 >seq1891 Length=76648 Score = 86.0 bits (94), Expect = 1e-11 Identities = 184/271 (68%), Gaps = 12/271 (4%) Strand=Plus/Plus Query 93427 ATTTCCCATACAGTTTTGAATAGTTCCTTGGTCGATTTA---GGGATATTAGGAAGCGTC 93483 ||||||||||| || ||| ||| || || | || | |||||| ||| || | Sbjct 36035 ATTTCCCATACTGTCTTGTATAATTGTTTAAT---TTCAGGTGGGATACTAGCAATATTT 36091 Query 93484 TGAATAGATCCACCACTTGCCATAATCCTCTGTTTAGT--TAC-TGAATTCCATTCTCCC 93540 ||||| ||| ||| || | | ||| | | || | ||| |||||||||| |||| Sbjct 36092 TGAATTGAT---CCATTTTCTAAAATAATTTTATTTCTCATACTTGAATTCCATAATCCC 36148 Query 93541 AGTTTTATGAGCTCTCTAATCACATATTCGTTCACCACTTGGAATGATCCTGAAAGTACA 93600 | | || | ||| |||| | ||||| || |||||||| ||| || |||||||| Sbjct 36149 AAATCAATTAAATCTTTAATTAAATATTTATTAACCACTTGAAATTCCCCAGAAAGTACT 36208 Query 93601 TTACGATTATACATGTTGGACGTTAAAGGCTCAAAGGATTCAGAGTTGCCCAGGATCTGT 93660 ||| |||||| ||| || || | || ||||| ||||| || ||||| ||| Sbjct 36209 CGACGGGTATACAAGTTAGAAGTATATGGTTCAAAACATTCATTAAATCCAAGGATTTGT 36268 Query 93661 GCAGTGGATGCAGTAGGCATGGGAGCAACAA 93691 | |||||| || || ||||| || ||||||| Sbjct 36269 GAAGTGGAAGCCGTGGGCATCGGTGCAACAA 36299 >seq1221 Length=135038 Score = 84.2 bits (92), Expect = 4e-11 Identities = 163/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATAT--- 35449 || || ||||| ||||| || || |||||||||||| | ||||| || || |||||| Sbjct 40636 GAAGGTGATTTAGGACCAGTTTATGGATTCCAATGGAGACATTTCGGAGCCGAATATCTA 40695 Query 35450 GATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAAT-ATACTAAA 35508 ||| ||| | || |||||||| |||| ||||||| | || || || |||| Sbjct 40696 GAT---TGTGATAGTGACTATACTGGTCAGGGGTTTGATCAGCTTGCAGATGTTATTAAA 40752 Query 35509 GACCCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGG 35567 | | | ||| ||||||| ||||| | || || |||||| | ||||||||||| | Sbjct 40753 AA--ATTAAAGACAAATCCATATGATCGTAGAATTATTATGTCTGCATGGAATCCACCTG 40810 Query 35568 ATCTTCACCTTATGGCTCTTCCTCCATGCCA-CATGACTGCTCAATTTTATGT 35619 || || | |||||| | || || || || | ||| |||||||||||| Sbjct 40811 ATTTTAAAAAAATGGCTTTACCACCTTGTCATGTTTTCTG-TCAATTTTATGT 40862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989553823872900