Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq333 320 2e-82
>seq333
Length=169781
Score = 320 bits (354), Expect = 2e-82
Identities = 615/898 (68%), Gaps = 13/898 (1%)
Strand=Plus/Plus
Query 13569 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13628
||||| || | ||||||| || |||||| ||||||||||| ||||| || || |
Sbjct 13652 ATAACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCT 13711
Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACC 13687
| || ||||| ||||| |||||||||||||| || |||| | | || || | | |||
Sbjct 13712 AAGGAAATATTCTCCATGAAATCAAATGGATTAGTT-ACATTATATACCTTCTTATTACC 13770
Query 13688 TAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13747
| | | | |||||||||||| | |||||||| ||||||| ||||||| | | ||
Sbjct 13771 AAAAGCAACCAATAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGTT 13830
Query 13748 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 13807
|||||||| | | || || | || || ||| |||| ||||| |||| |||||
Sbjct 13831 CATACCTAACAAACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAGC 13890
Query 13808 CTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 13867
|| ||||| || | || || | ||| || |||| ||| ||| |
Sbjct 13891 TTCAACAATAATTCTTTGCACGATTTCTGGATCAGGTCTATTCTTTAAATGGGCAAATAA 13950
Query 13868 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13927
| ||| ||||||||| ||| | || |||||||| ||| | ||| || || || ||
Sbjct 13951 CATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGT 14010
Query 13928 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAA 13987
|||||||||||| ||||||| ||| |||||||| || || | |||||| || || |||
Sbjct 14011 TAATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAA 14070
Query 13988 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14047
||| || || |||| |||||||| || | ||||| ||| || | | || | || |
Sbjct 14071 GAAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTATC 14130
Query 14048 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14107
| |||||||| |||||| | | || || |||| | || || | ||| ||
Sbjct 14131 GGCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGC 14190
Query 14108 ATTAAATAAATATTCCTTCTCTTTAG--TACTTGAAAT--GTATGTATCAATAAGTAAGC 14163
|| ||||||| |||| |||| || | ||| | || |||| |||||| ||| ||
Sbjct 14191 ATCAAATAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAA-AAG--AG- 14246
Query 14164 TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTT 14223
||| | |||||| || || |||| || || || |||||||| || | ||||||
Sbjct 14247 AATAAACTTCAGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTT 14306
Query 14224 CCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCAC 14283
| | ||| ||||| | | || |||| | ||||||||||||||||||||||||
Sbjct 14307 CAGGAACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAG 14366
Query 14284 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGT---T 14340
||| ||||| || || |||| ||| || || | || | || || | | |
Sbjct 14367 AAGCAGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTAT 14426
Query 14341 TTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14400
| ||||||||| |||||||||| | ||| | ||| ||| | ||||| || |||
Sbjct 14427 TGTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTT 14486
Query 14401 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14458
||||||||||||||||| ||||||||| | |||| || || || | ||||||||
Sbjct 14487 CAGCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATATAACAAATCT 14544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479713728092000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |