Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq333 320 2e-82 >seq333 Length=169781 Score = 320 bits (354), Expect = 2e-82 Identities = 615/898 (68%), Gaps = 13/898 (1%) Strand=Plus/Plus Query 13569 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13628 ||||| || | ||||||| || |||||| ||||||||||| ||||| || || | Sbjct 13652 ATAACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCT 13711 Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACC 13687 | || ||||| ||||| |||||||||||||| || |||| | | || || | | ||| Sbjct 13712 AAGGAAATATTCTCCATGAAATCAAATGGATTAGTT-ACATTATATACCTTCTTATTACC 13770 Query 13688 TAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13747 | | | | |||||||||||| | |||||||| ||||||| ||||||| | | || Sbjct 13771 AAAAGCAACCAATAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGTT 13830 Query 13748 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 13807 |||||||| | | || || | || || ||| |||| ||||| |||| ||||| Sbjct 13831 CATACCTAACAAACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAGC 13890 Query 13808 CTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 13867 || ||||| || | || || | ||| || |||| ||| ||| | Sbjct 13891 TTCAACAATAATTCTTTGCACGATTTCTGGATCAGGTCTATTCTTTAAATGGGCAAATAA 13950 Query 13868 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13927 | ||| ||||||||| ||| | || |||||||| ||| | ||| || || || || Sbjct 13951 CATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGT 14010 Query 13928 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAA 13987 |||||||||||| ||||||| ||| |||||||| || || | |||||| || || ||| Sbjct 14011 TAATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAA 14070 Query 13988 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14047 ||| || || |||| |||||||| || | ||||| ||| || | | || | || | Sbjct 14071 GAAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTATC 14130 Query 14048 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14107 | |||||||| |||||| | | || || |||| | || || | ||| || Sbjct 14131 GGCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGC 14190 Query 14108 ATTAAATAAATATTCCTTCTCTTTAG--TACTTGAAAT--GTATGTATCAATAAGTAAGC 14163 || ||||||| |||| |||| || | ||| | || |||| |||||| ||| || Sbjct 14191 ATCAAATAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAA-AAG--AG- 14246 Query 14164 TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTT 14223 ||| | |||||| || || |||| || || || |||||||| || | |||||| Sbjct 14247 AATAAACTTCAGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTT 14306 Query 14224 CCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCAC 14283 | | ||| ||||| | | || |||| | |||||||||||||||||||||||| Sbjct 14307 CAGGAACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAG 14366 Query 14284 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGT---T 14340 ||| ||||| || || |||| ||| || || | || | || || | | | Sbjct 14367 AAGCAGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTAT 14426 Query 14341 TTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14400 | ||||||||| |||||||||| | ||| | ||| ||| | ||||| || ||| Sbjct 14427 TGTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTT 14486 Query 14401 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14458 ||||||||||||||||| ||||||||| | |||| || || || | |||||||| Sbjct 14487 CAGCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATATAACAAATCT 14544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479713728092000