Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq333 298 5e-76
>seq333
Length=169781
Score = 298 bits (330), Expect = 5e-76
Identities = 611/899 (68%), Gaps = 13/899 (1%)
Strand=Plus/Plus
Query 13357 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCC 13416
||||| || | ||||||| || |||||| |||||||| || ||||| || || |
Sbjct 13652 ATAACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCT 13711
Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACC 13475
| || ||||| ||||| ||||| |||||||| ||| |||| | | || || | | |||
Sbjct 13712 AAGGAAATATTCTCCATGAAATCAAATGGATTAGTT-ACATTATATACCTTCTTATTACC 13770
Query 13476 TAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13535
| | | |||||||||||||| | |||||||| ||||||| ||||||| | | ||
Sbjct 13771 AAAAGCAACCAATAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGTT 13830
Query 13536 CATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGC 13595
|||||||| | | || || | || ||| ||| |||| ||||| |||| |||||
Sbjct 13831 CATACCTAACAAACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAGC 13890
Query 13596 CTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 13655
|| ||||| | | | || || | ||| || |||| ||| ||| |
Sbjct 13891 TTCAACAATAATTCTTTGCACGATTTCTGGATCAGGTCTATTCTTTAAATGGGCAAATAA 13950
Query 13656 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13715
| ||| ||||||||| ||| | || |||||||| ||| | ||| || || || ||
Sbjct 13951 CATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGT 14010
Query 13716 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 13775
|||||||||||| ||||||| ||| |||||||| || || | ||| || ||||| |||
Sbjct 14011 TAATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAA 14070
Query 13776 GAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTT 13835
||| || || |||| |||||||| || | || || ||| || | | || | || |
Sbjct 14071 GAAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTATC 14130
Query 13836 TGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGC 13895
| |||||||| |||||| | | || || |||| | || || | |||||
Sbjct 14131 GGCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGC 14190
Query 13896 ATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAAT--GTATGTATCAATAAGTAAGC 13951
|| |||||| ||| |||| || | ||| | || |||| |||||| ||| ||
Sbjct 14191 ATCAAATAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAA-AAG--AG- 14246
Query 13952 TATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTT 14011
||| | |||||| || || |||| || || || |||||||| || | ||||||
Sbjct 14247 AATAAACTTCAGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTT 14306
Query 14012 CTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCAC 14071
| | ||| || || | | || |||| | || ||||||||||| |||||||||
Sbjct 14307 CAGGAACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAG 14366
Query 14072 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGT---T 14128
||| ||||| || || |||| ||| || || | || | || || | | |
Sbjct 14367 AAGCAGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTAT 14426
Query 14129 TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14188
| ||||||||| |||||||||| | ||| | ||| ||| | ||||| || |||
Sbjct 14427 TGTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTT 14486
Query 14189 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTT 14247
||||||||||||||||| ||||||||| | |||| || || || | |||||||||
Sbjct 14487 CAGCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATATAACAAATCTT 14545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478574561983200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |