Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq1836 89.7 4e-13
seq221 84.2 2e-11
seq481 82.4 6e-11
>seq1836
Length=79629
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| || | |||| |||||||| | ||||| || ||
Sbjct 57119 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 57178
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | |||| || || || || |||||||||||||||| ||||| || | ||
Sbjct 57179 AAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGGA 57238
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || ||| ||||| || ||| ||||| || || ||
Sbjct 57239 ATACCTTCCTTGTCTTGGATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACT 57298
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||| || ||||| || || |||| ||| || || || ||||||||
Sbjct 57299 TCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57345
>seq221
Length=38424
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953
||| || |||||||| | ||| || ||||| | ||||||||| || || | |
Sbjct 37665 TCTCAAAACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCACTTAAGGTTCTACC 37724
Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013
|| ||||||||||| || ||||| || |||| |||||||| | || | |||||| ||
Sbjct 37725 ATCTTCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 37784
Query 43014 TTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTAT 43073
|| ||| |||||| | ||| |||||| | ||||| || | || ||
Sbjct 37785 ATCTTGAATCTTGGATTTGACATTATCAATGGTGTCGGAGGATTCGACTTCCAAAGTAAT 37844
Query 43074 AGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| || || |||| || || || ||||||||||||||
Sbjct 37845 GGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATTTT 37883
>seq481
Length=384
Score = 82.4 bits (90), Expect = 6e-11
Identities = 143/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 42902 CCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCA 42961
|||| || | |||| |||||||| | ||||| || || || || | |||| || |
Sbjct 1 CCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTA 60
Query 42962 ATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA 43021
| || || |||||||||||||||| ||||| || | || | |||||| || || ||
Sbjct 61 ACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 120
Query 43022 TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTC 43081
| ||||| || ||| ||||| || || || |||| || ||||| || |
Sbjct 121 TTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTAC 180
Query 43082 CGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| |||| ||| || || || ||||||||
Sbjct 181 CAGTTAAAGTCTTAACGAAGATTTGCAT 208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381358537898040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |