Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq221 118 8e-22 seq1836 91.5 1e-13 >seq221 Length=38424 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||| ||||| || |||||||||| || |||||||| ||||| ||||| | Sbjct 37653 ACCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCACT 37712 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| | |||| ||||||||||| || ||||| || || | ||| || || | || Sbjct 37713 TAAGGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 37772 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| |||||| ||| || |||||| || ||| || || | | || || Sbjct 37773 AATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATGGTGTCGGAGGATTCGAC 37832 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || ||||| ||||| ||||| || || |||||||| Sbjct 37833 TTCCAAAGTAATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCAT 37880 >seq1836 Length=79629 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| |||||||||||||| ||||| |||| || || ||||| ||||| ||||| Sbjct 56890 ACCACCTCTCAATCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGGATATTGTAATCAGA 56949 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| | | || || ||||| || || ||||| || || | ||| ||||| | || Sbjct 56950 TAAAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAAATTAATCTTTGTTGGTCAGGTGG 57009 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| || ||| || || ||| || | ||| || || | | || || Sbjct 57010 AATACCTTCCTTGTCTTGGATCTTAGATTTAACATTGTCAATGGTGTCAGAAGATTCAAC 57069 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || ||||| ||||||||||| || || |||||||| Sbjct 57070 TTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57117 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||| || ||||| |||| ||| || ||||| || || || || Sbjct 57118 ACCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 57177 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| | | || || || || || || ||||| ||||| | ||| ||||| | || Sbjct 57178 TAAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGG 57237 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| || ||| ||||| ||||| | ||| ||| || | | || || Sbjct 57238 AATACCTTCCTTGTCTTGGATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAAC 57297 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || ||||| ||||||||||| || || |||||||| Sbjct 57298 TTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354767309232240