Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq333 253 2e-62
>seq333
Length=169781
Score = 253 bits (280), Expect = 2e-62
Identities = 592/888 (67%), Gaps = 15/888 (2%)
Strand=Plus/Plus
Query 12861 TTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTT 12920
||||||| ||| |||||| |||||||| || || || || || |||| |||||||| |
Sbjct 13665 TTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCTAAGGAAATATTCT 13724
Query 12921 CCATAAAATCGAAAGGATTTTTCGAACAATAGTAT---TTTTTACACCCTAATTCTAGTA 12977
|||| ||||| || ||||| | ||| || ||| || ||| || || | | |
Sbjct 13725 CCATGAAATCAAATGGATTAGTT--ACATTA-TATACCTTCTTATTACCAAAAGCAACCA 13781
Query 12978 ACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTA 13037
| ||||| ||||| |||||||| | || || |||||| | ||||||| |||| |
Sbjct 13782 ATAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGTTCATACCTAACA 13841
Query 13038 ATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTA 13097
| | || || | ||| || || ||| | | ||||| ||| |||| ||||| | || |
Sbjct 13842 AACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAGCTTCAACAATAA 13901
Query 13098 TGTCTCTTATTACGTTCTCTAATGGAGG---ATTTGATAGATGCTTAAACATCATACATG 13154
| |||| ||| | ||| ||| ||| || ||| ||| | |||||| |
Sbjct 13902 T---TCTTTGCACGATTTCTGGATCAGGTCTATTCTTTAAATGGGCAAATAACATACAAG 13958
Query 13155 CAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCG 13214
|||||||| || |||||||||||||| |||| || || || || |||| || |
Sbjct 13959 CAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGTTAATCCTG 14018
Query 13215 GCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTC 13274
|||| | |||| ||| || | ||| || || | |||||| || || ||| || || |
Sbjct 14019 GCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAAGAAAATAC 14078
Query 13275 CTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCC 13334
|||||| || ||||| || | || |||||| |||| || ||| | ||||
Sbjct 14079 CTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTATCGGCGATCC 14138
Query 13335 ACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATA 13394
| || |||||||| || || | || || ||| | | ||||| | |||||
Sbjct 14139 ATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGCATCAAATA 14198
Query 13395 AATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTG 13454
|| | | ||| | | || || ||||||||||||||| | ||| | ||| |
Sbjct 14199 AAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAAAAGAGAATAAACTTCAG 14258
Query 13455 AATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAA 13514
||||||| |||| ||| |||||||||||||| || | |||| || | || ||||
Sbjct 14259 AATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTTCAGGAACTTGAA 14318
Query 13515 CTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaa 13574
|||| | | || |||| |||| ||||| |||||||| || ||| ||||||||| |
Sbjct 14319 CTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAGAAGCAGCAAAGA 14378
Query 13575 aaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAA---CTTTAACCAATCTG 13631
| || | || | ||| || | ||| || || ||| || ||||||
Sbjct 14379 AGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTATTGTTCCAATCGT 14438
Query 13632 GAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTAT 13691
| ||||| || |||||| | || ||| ||||||| || ||||| |||| || ||||
Sbjct 14439 GTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTTCAGCTTTTTTAT 14498
Query 13692 ACATCATCCATATATCCTTATAAACAATGGGAAACACAACGTATCTTC 13739
|||| |||||| || | ||| ||| || || | ||| ||||||
Sbjct 14499 ACATTTGCCATATTTCATGATATCTAATTGGGAATATAACAAATCTTC 14546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430969898816760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |