Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq777 89.7 8e-14 seq2158 86.0 1e-12 >seq777 Length=146766 Score = 89.7 bits (98), Expect = 8e-14 Identities = 165/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| ||||| || || |||||||||||| | | |||| | | ||||| | Sbjct 131797 GAGATAACATTCAAGGTATTACAAAGCCAGCTATCAGAAGATTGGCCAGAAGAGGTGGTG 131738 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | |||||| | || | || | |||||||| | | | |||||| || || | Sbjct 131737 TTAAGCGTATTTCCGCTTTAATTTATGAAGAAGTCAGAGTTGTTTTAAAACAATTTTTGG 131678 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | |||||| |||||| | ||||| || ||||| || | |||||||| || | Sbjct 131677 AAAATGTTATCAGAGATGCTGTTACTTATACTGAACACGCCAAGAGAAAGACTGTTACTT 131618 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 || ||||| | || || || || || | ||||| | | | ||||||||||| ||| Sbjct 131617 CCTTGGATGTTGTTTACGCCTTAAAGAGACAAGGTAGAACCTTGTATGGTTTTGGTGGTT 131558 Query 16698 AA 16699 || Sbjct 131557 AA 131556 >seq2158 Length=188701 Score = 86.0 bits (94), Expect = 1e-12 Identities = 172/254 (68%), Gaps = 1/254 (0%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||||||||| ||||| || ||||||||||||||| | | |||| | Sbjct 179379 AGATCT-TGAGAGATAACATTCAAGGTATTACCAAGCCAGCTATCAGAAGATTGGCCAGA 179321 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || |||||| | || | || | |||||||| | | | ||| ||||| Sbjct 179320 AGAGGTGGTGTTAAGCGTATTTCCGCTTTAATTTATGAAGAAGTCAGAGTTGTCTTGAAA 179261 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 || | | | ||||| |||||| | ||||| || ||||| || | ||| Sbjct 179260 CAATTTTTAGAAAATGTTATTAGAGATGCTGTTACTTATACTGAACACGCCAAGAGAAAG 179201 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 ||||| || || ||||| | || || || || || | ||||| | | | |||||| Sbjct 179200 ACTGTTACTTCTTTGGATGTTGTTTACGCCTTAAAGAGACAAGGTAGAACTTTGTATGGT 179141 Query 16688 TTTGGAAGTTAATC 16701 || || ||||||| Sbjct 179140 TTCGGTGGTTAATC 179127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073023949340