Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq333 298 6e-76
>seq333
Length=169781
Score = 298 bits (330), Expect = 6e-76
Identities = 596/884 (67%), Gaps = 11/884 (1%)
Strand=Plus/Plus
Query 21186 TTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATT 21245
|||||||||| |||||| ||||| || ||||| ||||| || | || || ||| |
Sbjct 13665 TTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCTAAGGAAATATTCT 13724
Query 21246 CCATAAAATCAAATGGATTT-TCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT 21304
|||| |||||||||||||| | | ||| | ||| || ||| ||| | | |||
Sbjct 13725 CCATGAAATCAAATGGATTAGTTACATT-ATATACCTTCTTATTACCAAAAGCAACCAAT 13783
Query 21305 AATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364
|||||||| |||||||| || | |||||||||||||||| | | |||||||| | |||
Sbjct 13784 AATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGTTCATACCTAACAAA 13843
Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATA 21424
| || || | ||| | || ||| | ||||| |||| || ||||||||||| ||
Sbjct 13844 CTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAGCTTCAACAATAATT 13903
Query 21425 TTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAA 21484
|| | | || | ||| || | ||| || ||| | || ||| ||||||
Sbjct 13904 CTTTGCACGATTTCTGGATCAGGTCTATTCTTTAAATGGGCAAATAACATACAAGCAAAA 13963
Query 21485 TCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATT 21544
||| ||| || |||||||| || |||||||||||||| || ||||| || ||||||
Sbjct 13964 TCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGTTAATCCTGGCATT 14023
Query 21545 AATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCA 21604
|||||||| || |||||||| || || || ||||| | ||| ||||||||| || |||
Sbjct 14024 AATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAAGAAAATACCTTCA 14083
Query 21605 ACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTT 21664
| |||||||| |||||||||| |||| | ||| | || ||||| ||||||||
Sbjct 14084 ATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTATCGGCGATCCATTTC 14143
Query 21665 TCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTT---TTAAAAGA 21721
||||| || ||||| | |||||| ||| |||| ||| || | |||||
Sbjct 14144 AAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGCATCAAATAAAAAT 14203
Query 21722 TGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAA 21781
| | || || | ||| | | | ||| | |||||||
Sbjct 14204 TCAGCTTCTTGA---GGATCCTTAACATAAGTATCTATCAAAAGAGAATAAACTTCAGAA 14260
Query 21782 TGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAACC 21841
|| || |||| ||| || || || || || || | | || || | | ||||||
Sbjct 14261 TGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTTCAGGAACTTGAACT 14320
Query 21842 TCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAAT 21901
|| | | | || || | || |||||||| ||||| |||||| || ||||| ||
Sbjct 14321 TCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAGAAGCAGCAAAGAAG 14380
Query 21902 GCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAATCTAAT 21958
|| |||| || ||||| ||||| ||||| | ||| || |||||||| |
Sbjct 14381 GCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTATTGTTCCAATCGTGT 14440
Query 21959 AAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATAC 22018
||||| || |||||| | |||||||| ||||| || ||| ||| |||||||||
Sbjct 14441 AAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTTCAGCTTTTTTATAC 14500
Query 22019 ATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCT 22062
|| ||| || |||| |||| | ||||| ||||| ||||| ||
Sbjct 14501 ATTTGCCATATTTCATGATATCTAATTGGGAATATAACAAATCT 14544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531884975951200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |