Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq333 168 2e-36 >seq333 Length=169781 Score = 168 bits (186), Expect = 2e-36 Identities = 523/802 (65%), Gaps = 22/802 (3%) Strand=Plus/Minus Query 22217 TAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCAT 22276 |||| ||||||||| | | || ||||||||| ||| ||| ||||| ||||| Sbjct 14384 TAGCCTTCTTTGCTGCTTCTGATGGTATAGTTAATGAAAATTTAGTGGAAAATTTCTGTG 14325 Query 22277 CTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATG 22336 ||||| ||||| || || || | | ||||||||| | ||||| |||||||||| Sbjct 14324 CTGAAGTTCAAGTTCCTGAAGCTAAAGCATTCTATGGTTTCCAAATCATGATTGAAATGA 14265 Query 22337 TTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAACAAC 22396 |||| | ||| |||||| | || || | | || | ||| | ||| Sbjct 14264 TTCATTCTGAAGTTTATTCTCTTTTGATAGATACTTATGTTAAGGATCCTCAAGAAGCTG 14205 Query 22397 GAAACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGC 22456 | ||||| || |||| || |||| || ||| || ||||| | ||||| Sbjct 14204 AATTTTTATTTGATGCAATTCATACTATTCCATGTATTGCCAAGAAGGCCAACTGGGCTT 14145 Query 22457 TGAAATGGATGAACAATGAACGTTCATTC---GCGGAACGTCTTATTGCATTTGCTGTGG 22513 |||||||||| | || | | | || || ||| | | |||| ||||||| Sbjct 14144 TGAAATGGATCGCCGATAAGGATGCCTTATATGCTGAAAGATTAGTTGCCTTTGCTGCTA 14085 Query 22514 TTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAA 22573 ||||||| ||||||||| |||| | ||| | | || || ||| |||| ||| | | | Sbjct 14084 TTGAAGGTATTTTCTTTAGTGGATCCTTTGCTTCGATTTTCTGGTTAAAGAAAAGAGGAT 14025 Query 22574 TTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCG 22633 | ||||| || |||| || || ||||| |||||| ||||||| || | ||||| | Sbjct 14024 TAATGCCAGGATTAACTTTCTCTAATGAATTAATTTCAAGAGATGAAGGATTACATACTG 13965 Query 22634 ATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTT---CCATATGAAACTG 22690 ||||||| |||||| ||| | ||| | | ||| || | ||| |||| | Sbjct 13964 ATTTTGCTTGTATGTTATTTGCC---CATTTAAAGAATAGACCTGATCCA---GAAATCG 13911 Query 22691 TACTTGATATTATTACAAATGCAGTTGAACTTGAAC--GTCTATTTATTTGCGAGGCGTT 22748 | | |||||| | || |||| ||||| | ||||| || | || || Sbjct 13910 TGCAAAGAATTATTGTTGAAGCTGTTGCTATTGAAAAGGAATATTTCACTG--ATGCTTT 13853 Query 22749 ACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGC 22808 |||||| ||| | | ||||| || | | || |||| || |||| || | ||||| || Sbjct 13852 ACCAGTTAGTTTGTTAGGTATGAACTCGGGATTAATGTGTCAATATGTTGAGTTTGTAGC 13793 Query 22809 AGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTGA 22868 ||| | |||| || | | ||| || ||| ||||| || |||||||||||| Sbjct 13792 TGATAGATTATTGGTTGCTTTTGGTAATAAGAAGGTATATAATGTAACTAATCCATTTGA 13733 Query 22869 ATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGA 22928 | ||||| |||||| | | || ||||| |||||||| ||||| |||||| || Sbjct 13732 TTTCATGGAGAATATTTCCTTAGCTGGGAAGACTAATTTCTTTGAAAAGAGAGTTTCCGA 13673 Query 22929 ATACCAAAAAGCAGGTGTTATGG--ATG--CATTGAATGA--TAGTTCAAAACACGGATT 22982 || |||| ||| |||||||||| | | | |||| | | ||||| || | ||| Sbjct 13672 TTATCAAAGAGCTGGTGTTATGGCCAAGACTAATGAACCAACTTCATCAAATCATGAATT 13613 Query 22983 TACATTAGATGAAGAATTTTAA 23004 || ||| |||||||| || ||| Sbjct 13612 TAAATTTGATGAAGATTTCTAA 13591 Score = 138 bits (152), Expect = 3e-27 Identities = 1066/1692 (63%), Gaps = 59/1692 (3%) Strand=Plus/Minus Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGT 363446 |||||| || | || || |||| | ||| || | | ||| | |||||| | ||| Sbjct 51249 TATTTT-GGTTTCAAAACCTTGGAAAGATCTTATTTGTTACGTGTTAATGGTAAAGTTGC 51191 Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 |||| | || || ||| | | ||| | |||||||||||||| ||| | ||| || Sbjct 51190 TGAAAGACCTCAACATTTACTTATGAGAGTTGCTATTGGTATTCATGGTGAAGATATTCC 51131 Query 363507 TGCCGCG--ATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC---ACGCACGCCACG 363561 ||| | |||||| ||||||| | ||| ||| || | || || | | Sbjct 51130 --CCGAGTAATTGAATCATATAA---TTTAATGTCTCAAAAATACTTTACCCATGGGTCC 51076 Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAA 363620 || || | | ||||||||| |||| | |||||| |||||||| || |||||| | Sbjct 51075 CCCACGTTATTCAATGCTGGTACTCCAAGTCCACAAATGTCTTCGTG-TTTCTTGGTTGC 51017 Query 363621 AATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTC 363680 |||||||| |||||||| || ||||| | ||||| | |||| |||||| | ||||| Sbjct 51016 TATGAAGGAAGATTCCATTGATGGTATTTACGACACGTTAAAGACGTGTGCTTTAATTTC 50957 Query 363681 CAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACA 363739 ||||| ||| || || ||||| || || || ||| | || || || | ||| | Sbjct 50956 CAAGAGTGCTGGTGGTATTGGGTTACATATTCATAATATCCGGGCCACTGGTTC-TTATA 50898 Query 363740 TTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798 || || || || |||| | || || | | |||||| || | || || |||| Sbjct 50897 TTGCTGGTACCAATGG-TACTTCCAACGGTATTATCCCCATGGTTAGAGTTTTCAACAAC 50839 Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 || || | || || || || ||||| ||| | ||| || ||||| | ||| | Sbjct 50838 ACGGCTCGTTATGTTGATCAAGGTGGTAACAAGAGACCAGGAGCTTTTGCCCTTTATTTA 50779 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918 || ||| ||||| ||||||||||| || |||| | | ||||| | || || || Sbjct 50778 GAACCTTGGCATGCGGATATTTTTGATTTCATTGATATTAGAAAAAATTCCGGTAAGGAA 50719 Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978 ||| | | || | ||| | ||| || | ||| || | || || ||||| || Sbjct 50718 GAAATTAGAGCTAGAGATTTATTCCCGGCGTTATGGATTCCGGATTTATTCATGAAACGA 50659 Query 363979 GTGGAGGCAGGTA-AGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037 || || | | ||||| || | | |||| ||| | ||| ||| ||| | | || Sbjct 50658 GTTGAACAAAATGGAGAAT-GGACTTTGTTTTCACCAAATGAAGCTCCTGGTTTACCTGA 50600 Query 364038 TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCG 364097 ||| | ||||| || | || | |||| |||| |||||| || || | | Sbjct 50599 TGTTTATGGTGATGAATTTGAAGAATTATATGAAAGATATGAAAGAGAAGGTCGTGGTAC 50540 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 ||| || || || || || |||||| | | ||| |||| | || | ||| ||||| Sbjct 50539 TAAAACTATCAAGGCTCAAAAATTATGGTATTCTATCTTGGAAGCTCAAACTGAAACAGG 50480 Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 || || | |||||| || || ||| | || ||| || ||||| || || | | || Sbjct 50479 TACTCCATTTATGTTATATAAGGATGCTTGTAACAAAAAATCCAATCAAAAGAATTTAGG 50420 Query 364218 TACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 ||| | || ||||| || ||| | ||||| | ||||| || || Sbjct 50419 GGTTATTAAATCTTCTAATTTATGTTGTGAAATTGTGGAATATTCTGCTCCTGATGAAGT 50360 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAA------GA------ 364325 |||||| ||||| | || || || || |||| | || || || || Sbjct 50359 TGCCGTGTGTAATTTAGCTTCTATTGCCATTCCATCATTCGTGGAAACTGATGAAAATCA 50300 Query 364326 ----TGGTAC--TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAA 364379 ||||| |||||| | || | |||| || || | | |||| | || Sbjct 50299 TTCTTGGTATAATTTTGAAAA-----AT-TACATGAGGTGACTAAAGTAGTTACTCGTAA 50246 Query 364380 TCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATAT 364439 | | | ||||| || || ||||||||| ||||||||||| || ||| ||||| Sbjct 50245 TTTAAATCGAGTTATTGATCGTAACTATTATCCAGTTCCTGAAGCCAAGAATTCAAATAT 50186 Query 364440 GCGTCATCG-CCCGATTGGTCTT-GGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC 364497 | | || | |||| ||| ||| ||||| ||||| | ||||| | ||||||| | | Sbjct 50185 GAGAAATAGACCCG--TGGCCTTGGGTGTCCAGGGTTTAGCTGATGCATTTATGA-GTTT 50129 Query 364498 AAGA-TGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556 |||| | |||||||||| | || ||||| | |||||| | || || ||||| || Sbjct 50128 AAGATTACCATTTGATTCTCAAGAAGCTCGGGAATTAAATATTCAAATTTTCGAAACCAT 50069 Query 364557 GTATTTTGCCGC-AATGACTGCTTCGTGTGATTTGGC-AAAAACCAAGGGAAAGTACTCT 364614 ||| ||| || ||| | | ||| ||| || || || | |||| | || | Sbjct 50068 TTATCATGCTGCTGTTGAAT-CCTCGGTTGAATTAGCTCAAGAAGAAGGCGCA-TATCCA 50011 Query 364615 ACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACG 364674 ||||| || || || ||| ||| || ||| ||| || |||||| ||||| | | Sbjct 50010 ACTTACGAAGGATCACCTGCTTCTCAAGGATTATTGCAATTTGATTTATGGGAAAGAAAA 49951 Query 364675 CCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGC 364734 || ||| |||| | ||||||| | || | || |||||| | Sbjct 49950 CCTACTGAATTATGGGATTGGGATAGTTTGAAGCAAAAAATGGCCAAACATGGTTTAAGA 49891 Query 364735 AACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAAC 364794 ||||| | | || || ||||| ||||| || || |||| ||| | || || || Sbjct 49890 AACTCATTATTGGTTGCTCCAATGCCTACGGCGTCAACATCACAAATCTTGGGTAATAAT 49831 Query 364795 GAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTT 364854 || || || ||||| | ||| ||| ||||||| | || ||| | | || ||||| Sbjct 49830 GAATGTTTTGAACCATATACTTCCAACATTTATTCTAGACGAGTTTTAGCTGGTGAATTC 49771 Query 364855 CCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGC 364914 | | |||||| || || | | ||| | || || | ||| ||| | Sbjct 49770 CAAATTGTTAATCCATATTTATTAAGAGATTTAGTTGATTTAGGAATTTGGAATGAATCC 49711 Query 364915 ATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGAT-TTCCAGA 364973 ||||||| || || ||| |||||||||| | || | |||| | || | || || Sbjct 49710 ATGAAGAGTAGCATTATTGCCAATAATGGTTCTATTCA-ATCATTACCTAATGTCCCTGA 49652 Query 364974 AGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC-CATGCGAAC-TCTCATTGAT 365031 || | ||| | ||||| ||||| ||||||||||| || ||| | | ||||| Sbjct 49651 TGAAATTAAGGAATTATACAAGACCGTGTGGGAAATTTCTCA--AAAACATATTGTTGAT 49594 Query 365032 ATGGCGGCCGAT 365043 |||||||||||| Sbjct 49593 ATGGCGGCCGAT 49582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303313855861160