Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq221 138 1e-27
seq1836 111 1e-19
>seq221
Length=38424
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
|||||||||| | || || || || |||||||| || | ||||| | |||||||| |
Sbjct 37884 CAAAATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTGGAAGTCGAATC 37825
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
| ||||||||| || | |||||| |||||| || || ||||| || || || ||
Sbjct 37824 CTCCGACACCATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCACCTGA 37765
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
|||||| ||| | || | | || || ||| | ||||||| |||| | | || |||||
Sbjct 37764 TCAACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACCTTAAGTGATTA 37705
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| || |||||||||||||| | ||||| || || ||||| ||||| ||
Sbjct 37704 CAATATCCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGG 37654
>seq1836
Length=79629
Score = 111 bits (122), Expect = 1e-19
Identities = 167/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || |||||||| || | |||||| | ||||| || |
Sbjct 57117 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57058
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| || | || ||| ||||| ||||| ||||| || || || || |||
Sbjct 57057 GACACCATTGACAATGTTAAATCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 56998
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169
|| ||| | |||| | || |||||| | ||||| | |||| | | | | ||||| ||
Sbjct 56997 CAAAGATTAATTTTTGCTGGTAAGCAATTAGAAGACGGTAGAA-CTTTATCTGATTACAA 56939
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224
|| ||||| |||||||| | || || || |||||||||||||| || | ||||
Sbjct 56938 TATCCAAAAGGAATCTACTTTACACTTGGTTTTAAGATTGAGAGGTGGTCAATAA 56884
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || |||||||| || | |||||| | ||||| || |
Sbjct 57345 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57286
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | ||||| || || ||||| ||||| || || || || |||
Sbjct 57285 GACACTATTGACAACGTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAA 57226
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169
|| ||| |||||| | ||| ||||| | ||||| | |||| | | | | || || ||
Sbjct 57225 CAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAA-CTTTATCTGACTACAA 57167
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||| ||||| ||||| || | || || || || ||||||||||| ||
Sbjct 57166 CATCCAAAAGGAATCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 57119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429923529168900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |