Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq221 138 1e-27 seq1836 111 1e-19 >seq221 Length=38424 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 |||||||||| | || || || || |||||||| || | ||||| | |||||||| | Sbjct 37884 CAAAATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTGGAAGTCGAATC 37825 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | ||||||||| || | |||||| |||||| || || ||||| || || || || Sbjct 37824 CTCCGACACCATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCACCTGA 37765 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 |||||| ||| | || | | || || ||| | ||||||| |||| | | || ||||| Sbjct 37764 TCAACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACCTTAAGTGATTA 37705 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || |||||||||||||| | ||||| || || ||||| ||||| || Sbjct 37704 CAATATCCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGG 37654 >seq1836 Length=79629 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || |||||||| || | |||||| | ||||| || | Sbjct 57117 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57058 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || ||| ||||| ||||| ||||| || || || || ||| Sbjct 57057 GACACCATTGACAATGTTAAATCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 56998 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || ||| | |||| | || |||||| | ||||| | |||| | | | | ||||| || Sbjct 56997 CAAAGATTAATTTTTGCTGGTAAGCAATTAGAAGACGGTAGAA-CTTTATCTGATTACAA 56939 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 || ||||| |||||||| | || || || |||||||||||||| || | |||| Sbjct 56938 TATCCAAAAGGAATCTACTTTACACTTGGTTTTAAGATTGAGAGGTGGTCAATAA 56884 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || |||||||| || | |||||| | ||||| || | Sbjct 57345 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57286 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| || || ||||| ||||| || || || || ||| Sbjct 57285 GACACTATTGACAACGTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAA 57226 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || ||| |||||| | ||| ||||| | ||||| | |||| | | | | || || || Sbjct 57225 CAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAA-CTTTATCTGACTACAA 57167 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| ||||| ||||| || | || || || || ||||||||||| || Sbjct 57166 CATCCAAAAGGAATCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 57119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429923529168900