Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq333 251 8e-62 >seq333 Length=169781 Score = 251 bits (278), Expect = 8e-62 Identities = 647/966 (67%), Gaps = 47/966 (5%) Strand=Plus/Plus Query 92742 TTAGAAATCTGCATCTAGTGTAAATACAT----TG-TCAAGTGGATTC-TTATTC----- 92790 |||||||||| |||| | | ||||| ||| || | |||| | ||| ||| || Sbjct 13591 TTAGAAATCTTCATCAAATTTAAATTCATGATTTGATGAAGTTGGTTCATTAGTCTTGGC 13650 Query 92791 -ATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||||||||| | |||| || || |||| | |||||||||||||| ||||| || | Sbjct 13651 CATAACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGC 13710 Query 92850 CAAAGATATCGAATTCACTA-GTGAT----TGGATTCTTGGCGTTATAA---TACTTTTC 92901 || || || |||| | | | || |||||| | | ||||| | ||| | Sbjct 13711 TAAGGAAAT---ATTCTCCATGAAATCAAATGGATTAGTTACATTATATACCTTCTTATT 13767 Query 92902 ACCGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAA 92959 ||| | |||| ||||||||||||||||||||| || | || ||| |||| || Sbjct 13768 ACCAAAAGCAAC-----CAATAATCTATCAGCTACAAACTCAACATATTGACACATTAAT 13822 Query 92960 TCACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATT 93019 | | ||||| |||| | || || |||| ||| || || || | || || || || Sbjct 13823 CCCGAGTTCATACCTAACAAACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATA 13882 Query 93020 ACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTTTTGT--ACGACAT 93077 |||| ||||| ||| | |||| || | || |||| ||| | || | | Sbjct 13883 GCAACAGCTTCAA-CAATAATTCT-TTGC---ACGATTTC-TGGATCAGGTCTATTCTTT 13936 Query 93078 AATTGTACAT-TAAG---CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAAC 93133 || || || ||| || ||||| || |||||||| ||||| |||| ||| || || Sbjct 13937 AAATGGGCAAATAACATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAAT 13996 Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 ||||| ||| ||||| ||||| | | ||||| |||||| | ||| || || |||||| Sbjct 13997 TCATTAGAGAAAGTTAATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCA 14056 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253 || ||| ||| || |||||||| | || ||||| || || | | ||| ||| | Sbjct 14057 AAGGATCCACTAAAGAAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATAT 14116 Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313 || ||| | ||||||||| |||||||| | ||| || || |||||| || Sbjct 14117 AAGGCATCCTTATCGGCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGA 14176 Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCG 93373 | || | || || | ||||| | || || | | ||| | || ||||| Sbjct 14177 ATAGTATGAATTGCATCAAATAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCT 14236 Query 93374 ATTAACAGAGAATACATTTCAGAATGGA-CATTCTCCATTGCAATTTGGAATCCGTAGAA 93432 || || |||||||| | ||||||||| | |||| || || |||||||| || ||||| Sbjct 14237 ATCAAAAGAGAATAAACTTCAGAATGAATCATT-TCAATCATGATTTGGAAACCATAGAA 14295 Query 93433 ACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGAC 93492 | ||||||| | | || ||||| | | || | || || | ||||||||| || Sbjct 14296 TGCTTTAGCTTCAGGAACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAAC 14355 Query 93493 TATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC 93552 ||||||||| || || ||||| || || |||| | || |||| |||| ||| Sbjct 14356 TATACCATCAGAAGCAGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATC 14415 Query 93553 -TTTAAGC--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCA 93609 || || | || | ||||||| || ||| || | ||||| |||||| | ||||| Sbjct 14416 ATTCAATCTATTGTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCA 14475 Query 93610 AAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669 || || ||||| |||||||| ||||| | |||||| || |||||| |||||| ||||| Sbjct 14476 GAATGAAGCTTCAGCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATAT 14535 Query 93670 GACAAA 93675 ||||| Sbjct 14536 AACAAA 14541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556844233391200