Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq333 251 8e-62
>seq333
Length=169781
Score = 251 bits (278), Expect = 8e-62
Identities = 647/966 (67%), Gaps = 47/966 (5%)
Strand=Plus/Plus
Query 92742 TTAGAAATCTGCATCTAGTGTAAATACAT----TG-TCAAGTGGATTC-TTATTC----- 92790
|||||||||| |||| | | ||||| ||| || | |||| | ||| ||| ||
Sbjct 13591 TTAGAAATCTTCATCAAATTTAAATTCATGATTTGATGAAGTTGGTTCATTAGTCTTGGC 13650
Query 92791 -ATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||||||||| | |||| || || |||| | |||||||||||||| ||||| || |
Sbjct 13651 CATAACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGC 13710
Query 92850 CAAAGATATCGAATTCACTA-GTGAT----TGGATTCTTGGCGTTATAA---TACTTTTC 92901
|| || || |||| | | | || |||||| | | ||||| | ||| |
Sbjct 13711 TAAGGAAAT---ATTCTCCATGAAATCAAATGGATTAGTTACATTATATACCTTCTTATT 13767
Query 92902 ACCGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAA 92959
||| | |||| ||||||||||||||||||||| || | || ||| |||| ||
Sbjct 13768 ACCAAAAGCAAC-----CAATAATCTATCAGCTACAAACTCAACATATTGACACATTAAT 13822
Query 92960 TCACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATT 93019
| | ||||| |||| | || || |||| ||| || || || | || || || ||
Sbjct 13823 CCCGAGTTCATACCTAACAAACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATA 13882
Query 93020 ACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTTTTGT--ACGACAT 93077
|||| ||||| ||| | |||| || | || |||| ||| | || | |
Sbjct 13883 GCAACAGCTTCAA-CAATAATTCT-TTGC---ACGATTTC-TGGATCAGGTCTATTCTTT 13936
Query 93078 AATTGTACAT-TAAG---CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAAC 93133
|| || || ||| || ||||| || |||||||| ||||| |||| ||| || ||
Sbjct 13937 AAATGGGCAAATAACATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAAT 13996
Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193
||||| ||| ||||| ||||| | | ||||| |||||| | ||| || || ||||||
Sbjct 13997 TCATTAGAGAAAGTTAATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCA 14056
Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253
|| ||| ||| || |||||||| | || ||||| || || | | ||| ||| |
Sbjct 14057 AAGGATCCACTAAAGAAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATAT 14116
Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313
|| ||| | ||||||||| |||||||| | ||| || || |||||| ||
Sbjct 14117 AAGGCATCCTTATCGGCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGA 14176
Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCG 93373
| || | || || | ||||| | || || | | ||| | || |||||
Sbjct 14177 ATAGTATGAATTGCATCAAATAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCT 14236
Query 93374 ATTAACAGAGAATACATTTCAGAATGGA-CATTCTCCATTGCAATTTGGAATCCGTAGAA 93432
|| || |||||||| | ||||||||| | |||| || || |||||||| || |||||
Sbjct 14237 ATCAAAAGAGAATAAACTTCAGAATGAATCATT-TCAATCATGATTTGGAAACCATAGAA 14295
Query 93433 ACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGAC 93492
| ||||||| | | || ||||| | | || | || || | ||||||||| ||
Sbjct 14296 TGCTTTAGCTTCAGGAACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAAC 14355
Query 93493 TATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC 93552
||||||||| || || ||||| || || |||| | || |||| |||| |||
Sbjct 14356 TATACCATCAGAAGCAGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATC 14415
Query 93553 -TTTAAGC--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCA 93609
|| || | || | ||||||| || ||| || | ||||| |||||| | |||||
Sbjct 14416 ATTCAATCTATTGTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCA 14475
Query 93610 AAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669
|| || ||||| |||||||| ||||| | |||||| || |||||| |||||| |||||
Sbjct 14476 GAATGAAGCTTCAGCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATAT 14535
Query 93670 GACAAA 93675
|||||
Sbjct 14536 AACAAA 14541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556844233391200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |