Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq221 156 4e-33
seq1836 141 8e-29
seq481 123 2e-23
>seq221
Length=38424
Score = 156 bits (172), Expect = 4e-33
Identities = 167/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||||||||| ||||| || ||||| ||||| || | ||| | ||||| ||| ||
Sbjct 37883 AAAATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTGGAAGTCGAATCC 37824
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | || || ||||| || |||||||| ||||| ||||||||||| |||
Sbjct 37823 TCCGACACCATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCACCTGAT 37764
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || ||||| || ||||| || || ||| | ||| | ||||||
Sbjct 37763 CAACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACCTTAAGTGATTAC 37704
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|| || ||||||||||| || ||||||| |||||| ||||
Sbjct 37703 AATATCCAAAAAGAATCTACTTTACATTTGGTTTTGAGATT 37663
>seq1836
Length=79629
Score = 141 bits (156), Expect = 8e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| |||||||| ||||| || | || | ||||| ||| | |
Sbjct 57345 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57286
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| ||||| ||||||||||| ||||||||||| || |||
Sbjct 57285 GACACTATTGACAACGTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAA 57226
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || |||||||| || |||||||| || | || | || || ||||||
Sbjct 57225 CAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACAAC 57166
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| |||||||| |||| || |||||| ||||| | || |||
Sbjct 57165 ATCCAAAAGGAATCCACTTTACACTTGGTTTTGAGATTGAGAGGTGGT 57118
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| |||||||| ||||| || | || | ||||| ||| | |
Sbjct 57117 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57058
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | ||| || || ||||||||||| ||||||||||| || |||
Sbjct 57057 GACACCATTGACAATGTTAAATCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 56998
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || || ||||| || | || | || ||||||||
Sbjct 56997 CAAAGATTAATTTTTGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGATTACAAT 56938
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| || |||| || ||||| ||||| | || |||
Sbjct 56937 ATCCAAAAGGAATCTACTTTACACTTGGTTTTAAGATTGAGAGGTGGT 56890
>seq481
Length=384
Score = 123 bits (136), Expect = 2e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| |||||||| ||||| || | || | ||||| ||| | |
Sbjct 208 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 149
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| ||||| ||||||||||| ||||||||||| || |||
Sbjct 148 GACACTATTGACAACGTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 89
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || |||||||| || |||||||| || | || | || || ||||||
Sbjct 88 CAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACAAC 29
Query 22399 ATTCAAAAAGAATCCACCATACATTT 22424
|| ||||| |||||||| |||| ||
Sbjct 28 ATCCAAAAGGAATCCACTTTACACTT 3
Score = 111 bits (122), Expect = 1e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||| ||||||||||| ||||||||||| || |||||| | | || |||||||| ||
Sbjct 352 AAAATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATTTTTGCCGGTAAG 293
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
|||||||| || | || | || || |||||||| ||||| |||||||| ||||
Sbjct 292 CAGTTAGAAGACGGTAGAACTTTATCTGACTACAACATCCAAAAGGAATCCACTTTACAC 233
Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446
|| |||||| ||||| | || |||
Sbjct 232 TTGGTTTTGAGATTGAGAGGTGGT 209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419715825264700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |