Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1836 178 2e-39 seq481 172 1e-37 seq221 158 2e-33 >seq1836 Length=79629 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||||| ||||| || ||||||||||| || || || | || || || || Sbjct 57133 CAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTC 57192 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||||||||| ||||| || || | |||||||||||| |||||||| ||||||||||| Sbjct 57193 TTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 57252 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || | ||||||| || || ||||| | ||||| ||||| ||||| || || Sbjct 57253 TTGGATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGT 57312 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||| ||||| || ||||| Sbjct 57313 CTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57345 Score = 158 bits (174), Expect = 2e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||||| || || || |||||||| || ||||| || | || || || ||| Sbjct 56906 AAAACCAAGTGTAAAGTAGATTCCTTTTGGATATTGTAATCAGATAAAGTTCTACCGTCT 56965 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| ||||| || || || || | |||||||||||| |||||||| |||||||||||| Sbjct 56966 TCTAATTGCTTACCAGCAAAAATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCT 57025 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| | || || || |||||||| | ||||| ||||| ||||| || || Sbjct 57026 TGGATCTTAGATTTAACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTC 57085 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||| ||||| || ||||| Sbjct 57086 TTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57117 >seq481 Length=384 Score = 172 bits (190), Expect = 1e-37 Identities = 163/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 68254 CCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 ||||||||| ||||| || ||||||||||| || || || | || || || ||||||| Sbjct 1 CCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTA 60 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||||||| ||||| || || | |||||||||||| |||||||| |||||||||||||| | Sbjct 61 ACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 120 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | || | ||||||| || || ||||| | ||||| ||||| ||||| || || || | Sbjct 121 TTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTAC 180 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | ||||| ||||| || ||||| Sbjct 181 CAGTTAAAGTCTTAACGAAGATTTGCAT 208 Score = 141 bits (156), Expect = 2e-28 Identities = 128/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||||| ||||| || ||||||||||| || || || | || || || || Sbjct 224 CAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTC 283 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||||||||| ||||| || || | |||||||||||| |||||||| ||||||||||| Sbjct 284 TTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 343 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATT 68409 ||| || || | ||||||| || || ||||| | |||| Sbjct 344 TTGGATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATT 384 >seq221 Length=38424 Score = 158 bits (174), Expect = 2e-33 Identities = 165/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| |||| || || ||||||||||| || ||||| | || || ||||| Sbjct 37668 CAAAACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCACTTAAGGTTCTACCATC 37727 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | ||||||||| || |||||||| |||||||| || Sbjct 37728 TTCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATC 37787 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | ||||| || |||||||| | ||||| |||||||| || ||||| Sbjct 37788 TTGAATCTTGGATTTGACATTATCAATGGTGTCGGAGGATTCGACTTCCAAAGTAATGGT 37847 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || || | |||||| ||||| || |||||| || Sbjct 37848 CTTACCAGTTAAGGTCTTAACGAAAATTTGCATTTTG 37884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921594981733600