Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq481 95.1 3e-14 seq221 93.3 1e-13 seq1836 89.7 1e-12 >seq481 Length=384 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | | || | ||||||||||| || || || || || Sbjct 17 TTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAA 76 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | ||||| | ||| || ||||| || || |||||||| | || ||||| Sbjct 77 AATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTGGACTTGACGTT 136 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| ||||| | || || ||||| || || | |||||| || Sbjct 137 GTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAAC 196 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 197 GAAGATTTGCAT 208 >seq221 Length=38424 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||||||||| || || | || | || ||||| |||||||| || || || Sbjct 37689 TTCTTTTTGGATATTGTAATCACTTAAGGTTCTACCATCTTCCAATTGTTTACCAGCAAA 37748 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | | |||||| | ||| || ||||| ||||| || || || | ||| || || Sbjct 37749 GATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATT 37808 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||||| ||||| | || || ||||| || || | ||||| || Sbjct 37809 ATCAATGGTGTCGGAGGATTCGACTTCCAAAGTAATGGTCTTACCAGTTAAGGTCTTAAC 37868 Query 288462 GAATATCTGCATTATG 288477 ||| || |||||| || Sbjct 37869 GAAAATTTGCATTTTG 37884 >seq1836 Length=79629 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | | || | ||||||||||| || || || || || Sbjct 57154 TTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAA 57213 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | ||||| ||| || ||||| || || |||||||| | || ||||| Sbjct 57214 AATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATTTTGGACTTGACGTT 57273 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| ||||| | || || ||||| || || | |||||| || Sbjct 57274 GTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAAC 57333 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 57334 GAAGATTTGCAT 57345 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||||||||| || || | | || | |||||||||||||| || || || || Sbjct 56926 TTCCTTTTGGATATTGTAATCAGATAAAGTTCTACCGTCTTCTAATTGCTTACCAGCAAA 56985 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || | | ||||| | ||| || ||||| || || ||||| || | ||| || || Sbjct 56986 AATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGATTTAACATT 57045 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || ||||| ||||| | || || ||||| || || | |||||| || Sbjct 57046 GTCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAAC 57105 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 57106 GAAGATTTGCAT 57117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179618427913640