Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1836 95.1 1e-14 seq481 82.4 8e-11 >seq1836 Length=79629 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 41974 TTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGT 42033 ||||| |||| ||||| || | || ||||| || || || |||||||| ||||||| Sbjct 56883 TTTATTGACCACCTCTCAATCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGGATATTGT 56942 Query 42034 AATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT 42093 |||||| | ||| | |||| |||| ||||||||||| || || | || || |||| Sbjct 56943 AATCAGATAAAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAAATTAATCTTTGTTGGT 57002 Query 42094 CGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCG 42153 | | ||| | | |||||||| ||| || ||| | | | | ||||| | Sbjct 57003 CAGGTGGAATACCTTCCTTGTCTTGGATCTTAGATTTAACATTGTCAATGGTGTCAGAAG 57062 Query 42154 ATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || | || || || || || |||| ||||| || ||||||||||| Sbjct 57063 ATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57117 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || | ||| ||||| || || ||| |||||||| || ||||| |||| Sbjct 57118 ACCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 57177 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 | ||| | |||| |||| ||||||||| || || || | || || ||||| | ||| Sbjct 57178 TAAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGG 57237 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACC-GTGTCGCTCGATTCCA 42159 | | |||||||| |||||| |||| ||| | || ||||| ||||| | Sbjct 57238 AATACCTTCCTTGTCTTGGATTTTGGACTTGA-CGTTGTCAATAGTGTCAGAAGATTCAA 57296 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | || || || || || |||| ||||| || ||||||||||| Sbjct 57297 CTTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57345 >seq481 Length=384 Score = 82.4 bits (90), Expect = 8e-11 Identities = 145/209 (69%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 42001 CCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTA 42060 |||| || || ||| |||||||| || ||||| |||| | ||| | |||| |||| Sbjct 1 CCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTA 60 Query 42061 GCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGA 42120 ||||||||| || || || | || || ||||| | ||| | | |||||||| || Sbjct 61 ACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 120 Query 42121 TTTTTTGTTTGAGCGTCGCCACC-GTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 |||| |||| ||| | || ||||| ||||| || || | || || || || Sbjct 121 TTTTGGACTTGA-CGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTA 179 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| ||||| || ||||||||||| Sbjct 180 CCAGTTAAAGTCTTAACGAAGATTTGCAT 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543196639419200