Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq1836 136 3e-27
seq221 131 1e-25
seq481 105 5e-18
>seq1836
Length=79629
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||||||||| || || | ||||| || ||||| || ||||||||
Sbjct 56891 CCACCTCTCAATCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGGATATTGTAATCAGAT 56950
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| ||||||||||||| || ||||| | || || | |||||||| ||||
Sbjct 56951 AAAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAAATTAATCTTTGTTGGTCAGGTGGA 57010
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| || || ||| ||| | || || || || | ||| ||
Sbjct 57011 ATACCTTCCTTGTCTTGGATCTTAGATTTAACATTGTCAATGGTGTCAGAAGATTCAACT 57070
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
||||||||||| || ||||| || | ||| || || || |||||||||
Sbjct 57071 TCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCATA 57118
Score = 127 bits (140), Expect = 1e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| ||||| || || | || || || ||||| |||||||| ||
Sbjct 57119 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 57178
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| |||||||||| || || || || | ||||| | |||||||| ||||
Sbjct 57179 AAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGGA 57238
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| |||||| || || | || ||||| || | ||| ||
Sbjct 57239 ATACCTTCCTTGTCTTGGATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACT 57298
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
||||||||||| || ||||| || | ||| || || || |||||||||
Sbjct 57299 TCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCATA 57346
>seq221
Length=38424
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| ||||| ||||| ||||| | ||||| |||||||| || |||||||| ||
Sbjct 37654 CCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCACTT 37713
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| |||| | ||||| |||||||| ||||| | || || | ||||| || ||||
Sbjct 37714 AAGGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 37773
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| |||||||| || ||| ||| ||| ||| | || || || ||| ||| ||
Sbjct 37774 ATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATGGTGTCGGAGGATTCGACT 37833
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| || |||||||| ||||| || | || || || ||||||||||| ||
Sbjct 37834 TCCAAAGTAATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATTTT 37883
>seq481
Length=384
Score = 105 bits (116), Expect = 5e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCA 15039
|| || || ||||| |||||||| || | | |||| |||||||||| || || ||
Sbjct 12 GTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAACTGCTTACCG 71
Query 15040 GCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTT 15099
|| | ||||| | |||||||| |||||| ||||||||||| |||||| ||
Sbjct 72 GCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTGGACTTG 131
Query 15100 ACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTT 15159
|| | || ||||| || | ||| || ||||||||||| || ||||| || | |||
Sbjct 132 ACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGTC 191
Query 15160 TTTACAAAAATTTGCATA 15177
|| || || |||||||||
Sbjct 192 TTAACGAAGATTTGCATA 209
Score = 89.7 bits (98), Expect = 4e-13
Identities = 120/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| ||||| || || | || || || ||||| |||||||| ||
Sbjct 210 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 269
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| |||||||||| || || || || | ||||| | |||||||| ||||
Sbjct 270 AAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGA 329
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATC 15116
|| ||||||||||| |||||| || || | || ||||| ||
Sbjct 330 ATACCTTCCTTGTCTTGGATTTTGGACTTGACGTTGTCAATAGTGTC 376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357381633398300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |