Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq221 145 7e-30
seq1836 98.7 9e-16
seq481 93.3 4e-14
>seq221
Length=38424
Score = 145 bits (160), Expect = 7e-30
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||| | || ||||| ||||||||||| ||||| || | |||| || |
Sbjct 37666 CTCAAAACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCACTTAAGGTTCTACCA 37725
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||||||||| || || | || |||| ||| || || || ||||| ||||| |||
Sbjct 37726 TCTTCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTA 37785
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || ||||| || | ||||||||| || |||||||| | |||||
Sbjct 37786 TCTTGAATCTTGGATTTGACATTATCAATGGTGTCGGAGGATTCGACTTCCAAAGTAATG 37845
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| || || || |||||||||||
Sbjct 37846 GTCTTACCAGTTAAGGTCTTAACGAAAATTTGCAT 37880
>seq1836
Length=79629
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203
|| ||||||||||||||||| ||||| | ||| || || || ||||| || ||
Sbjct 56921 GTAGATTCCTTTTGGATATTGTAATCAGATAAAGTTCTACCGTCTTCTAATTGCTTACCA 56980
Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263
|| | || |||| ||| ||||| || ||||| ||||| || ||||| || || |||
Sbjct 56981 GCAAAAATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGATTTA 57040
Query 45264 ATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTT 45323
| || | |||||| ||||| || ||||| | |||| || || || |||| |||
Sbjct 57041 ACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGTC 57100
Query 45324 TTTACAAAAATTTGCAT 45340
|| || || ||||||||
Sbjct 57101 TTAACGAAGATTTGCAT 57117
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || | || |||||||||||||| || || || | ||| ||
Sbjct 57131 CTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCG 57190
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || || || || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 57191 TCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTG 57250
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||| ||||| |||| || | || | ||||| ||||| || ||||| | ||||
Sbjct 57251 TCTTGGATTTTGGACTTGA-CGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAAT 57309
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| ||| || || || ||||||||
Sbjct 57310 AGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57345
>seq481
Length=384
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203
|| |||||||||||||| || || || | ||| || || || || || || ||
Sbjct 12 GTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAACTGCTTACCG 71
Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263
|| | ||||||| ||| ||||| || ||||| ||||| || ||||| ||||| |||
Sbjct 72 GCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTGGACTTG 131
Query 45264 ATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGT 45322
| || | || | ||||| ||||| || ||||| | |||| || || || |||| |||
Sbjct 132 A-CGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGT 190
Query 45323 TTTTACAAAAATTTGCAT 45340
|| || || ||||||||
Sbjct 191 CTTAACGAAGATTTGCAT 208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451989752904800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |