Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq221 145 7e-30 seq1836 98.7 9e-16 seq481 93.3 4e-14 >seq221 Length=38424 Score = 145 bits (160), Expect = 7e-30 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | ||| | || ||||| ||||||||||| ||||| || | |||| || | Sbjct 37666 CTCAAAACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCACTTAAGGTTCTACCA 37725 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||||||||| || || | || |||| ||| || || || ||||| ||||| ||| Sbjct 37726 TCTTCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTA 37785 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || ||||| || | ||||||||| || |||||||| | ||||| Sbjct 37786 TCTTGAATCTTGGATTTGACATTATCAATGGTGTCGGAGGATTCGACTTCCAAAGTAATG 37845 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||| || || || ||||||||||| Sbjct 37846 GTCTTACCAGTTAAGGTCTTAACGAAAATTTGCAT 37880 >seq1836 Length=79629 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203 || ||||||||||||||||| ||||| | ||| || || || ||||| || || Sbjct 56921 GTAGATTCCTTTTGGATATTGTAATCAGATAAAGTTCTACCGTCTTCTAATTGCTTACCA 56980 Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263 || | || |||| ||| ||||| || ||||| ||||| || ||||| || || ||| Sbjct 56981 GCAAAAATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGATTTA 57040 Query 45264 ATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTT 45323 | || | |||||| ||||| || ||||| | |||| || || || |||| ||| Sbjct 57041 ACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGTC 57100 Query 45324 TTTACAAAAATTTGCAT 45340 || || || |||||||| Sbjct 57101 TTAACGAAGATTTGCAT 57117 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || | || |||||||||||||| || || || | ||| || Sbjct 57131 CTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCG 57190 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || || || || || || | ||||||| ||| ||||| || ||||| ||||| || Sbjct 57191 TCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTG 57250 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| ||||| |||| || | || | ||||| ||||| || ||||| | |||| Sbjct 57251 TCTTGGATTTTGGACTTGA-CGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAAT 57309 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||| ||| || || || |||||||| Sbjct 57310 AGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57345 >seq481 Length=384 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203 || |||||||||||||| || || || | ||| || || || || || || || Sbjct 12 GTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAACTGCTTACCG 71 Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263 || | ||||||| ||| ||||| || ||||| ||||| || ||||| ||||| ||| Sbjct 72 GCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTGGACTTG 131 Query 45264 ATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGT 45322 | || | || | ||||| ||||| || ||||| | |||| || || || |||| ||| Sbjct 132 A-CGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGT 190 Query 45323 TTTTACAAAAATTTGCAT 45340 || || || |||||||| Sbjct 191 CTTAACGAAGATTTGCAT 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451989752904800