Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq333 114 2e-20 >seq333 Length=169781 Score = 114 bits (126), Expect = 2e-20 Identities = 814/1301 (63%), Gaps = 25/1301 (2%) Strand=Plus/Plus Query 116062 TCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 116121 ||||| | |||||| || | | ||||| || || || ||||| || | || |||| Sbjct 49958 TCCCATAAATCAAATTGCAATAATCCTTGAGAAGCAGGTGATCCTTCGTAAGTTGGATAT 50017 Query 116122 GGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTC 116178 | ||| || | | || ||||| ||| | || | || || ||||| || || Sbjct 50018 GCGCCTTCTTCTTGAGCTAATTCAACCGAG---GATTCAACAGCAGCATGATAAATGGTT 50074 Query 116179 TCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA 116238 || ||||| || ||| | | || || || | |||||||| | | | | Sbjct 50075 TCGAAAATTTGAATATTTAATTCCCGAGCTTCTTGAGAATCAAATGGTAATCTTAAACTC 50134 Query 116239 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 116298 |||||| |||| || | ||| |||||||| | | | | || | || ||||||||| || Sbjct 50135 ATAAATGCATCAGCTAAACCCTGGACACCCAAGGCCACGGGTCTATTTCTCATATTTGAA 50194 Query 116299 TTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 116358 || || || |||||| | || | ||| ||||| | ||||| ||| || Sbjct 50195 TTCTTGGCTTCAGGAACTGGATAATAGTTACGATCAATAACTCGATTTAAATTACGAGTA 50254 Query 116359 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAAT-----CAAAACTGCGAGTCTCTTCA- 116412 || || || || | ||||| | ||||| ||| ||| | || | | || ||| Sbjct 50255 ACTACTTTAGTCACCTCATGTAATTTTTCAAAATTATACCAAGAATG--ATTTTCATCAG 50312 Query 116413 TTGACAT-ACTTA-GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 116470 || || | | | |||| ||| || || || | ||||||||| | ||||| | Sbjct 50313 TTTCCACGAATGATGGAATGGCAATAGAAGCTAAATTACACACGGCAACTTCATCAGGAG 50372 Query 116471 CAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTT 116530 ||| || || | |||||| ||| ||||| ||| ||||| || || ||||||| Sbjct 50373 CAGAATATTCCACAATTTCACAACATAAATTAGAAGATTTAATAACCCCTAAATTCTTTT 50432 Query 116531 GATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTT 116590 |||| || ||| ||||||| |||||||| || | |||| |||| || || || || |||| Sbjct 50433 GATTGGATTTTTTGTTACAAGCATCCTTATATAACATAAATGGAGTACCTGTTTCAGTTT 50492 Query 116591 GGGACTTGAGAATAGCCTTCCAT-ACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCC 116649 | | | | |||| | |||| | | | | || | | ||| | | || || Sbjct 50493 GAGCTTCCAAGATAGAATACCATAATTTTTGAGCCTTG-ATAGTTTTAGTACCACGACCT 50551 Query 116650 TCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCT 116709 || || || || || | | ||||| || ||||| | | || | | || Sbjct 50552 TCTCTTTCATATCTTTCATATAATTCTTCAAATTCATCACCATAAACATCAGGTAAACCA 50611 Query 116710 GGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAG 116769 || || | || ||| | || | || ||||| ||| | ||||| || |||||||| Sbjct 50612 GGAGCTTCATTTGGTGAAAACAAAGTCCATTCTCCATTTTGTTCAACTCGTTTCATGAAT 50671 Query 116770 AGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 116829 | || || ||||| | ||||| ||| | ||| | | | | |||||| | || | Sbjct 50672 AAATCCGGAATCCATAACGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGGAA 50731 Query 116830 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 116889 || | | || | || || | |||||||| ||||| ||||| | || | || Sbjct 50732 TTTTTTCTAATATCAATGAAATCAAAAATATCCGCATGCCAAGGTTCTAAATAAAGGGCA 50791 Query 116890 ATTGACCCCTTGCGAC----GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATAC 116945 | | | ||| | | |||| | || | ||||| | ||||| ||| || || Sbjct 50792 AAAG-CTCCTGGTCTCTTGTTACCACCTTGATCAACATAACGAGCCGTGTTGTTGAAAAC 50850 Query 116946 GCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTT 117005 | || ||| || || ||||| | || ||||| || || |||| ||| | Sbjct 50851 TCTAACCATGGGGATAATACCGTTGGAAGTACCATTGGTACCAGCAATATAAGAACCAGT 50910 Query 117006 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCA 117065 ||| | || || || || || | |||||||| || || | ||| || ||| || || Sbjct 50911 GGCCCGGATATTATGAATATGTAACCCAATACCACCAGCACTCTTGGAAATTAAAGCACA 50970 Query 117066 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 117125 | | | | || |||| || ||||| || || || |||| | || | | ||| || Sbjct 50971 CGTCTTTAACGTGTCGTAAATACCATCAATGGAATCTTCCTTCATAGCAACCAAGAAACA 51030 Query 117126 GCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 ||||||||||| ||||| |||||||| ||||| | || || | | | ||| | || Sbjct 51031 CGAAGACATTTGTGGACTTGGAGTACCAGCATTGAATAACGTGGGGGACCCATGGGTAAA 51090 Query 117186 CATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAAT 117245 ||| ||||| || || | || | || |||||| ||||| || ||||| Sbjct 51091 GTATTTTTGAGACATTAAATTATATGATTCAATTACTCGGGGAATATCTTCACCATGAAT 51150 Query 117246 ACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCT 117305 ||| || | || | ||||| | | ||| ||| |||| | |||||| | | Sbjct 51151 ACCAATAGCAACTCTCATAAGTAAATGTTGAGGTCTTTCAGCAACTTTACCATTAACACG 51210 Query 117306 CTGGAGGTAA-CTCTTCTCCAAGGTCTTGAGACCAAAATAG 117345 | ||| |||| |||||||| |||| |||||||||| Sbjct 51211 TAACAAATAAGATCTT-TCCAAGGTTTTGAAACCAAAATAG 51250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613488948160800