Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1836 89.7 6e-13 seq481 82.4 9e-11 >seq1836 Length=79629 Score = 89.7 bits (98), Expect = 6e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | ||| |||| || || || ||||||||||| |||||||| ||| Sbjct 57119 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 57178 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||| | |||| || | |||||| ||||| || ||||| | || ||||| | || Sbjct 57179 AAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGGA 57238 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | |||||||| ||| || ||||| ||| | | | ||||| ||||| || Sbjct 57239 ATACCTTCCTTGTCTTGGATTTTGGACTTGA-CGTTGTCAATAGTGTCAGAAGATTCAAC 57297 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || || || || || | || ||||| ||||||||||| Sbjct 57298 TTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57345 >seq481 Length=384 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| |||||||| |||| ||| | |||| || | |||||| ||||| || Sbjct 18 TCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAA 77 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | || ||||| | || | | |||||||| ||| || ||||| ||| Sbjct 78 ATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTGGACTTGA-CGTT 136 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| ||||| || || | || || || || || || | || ||||| Sbjct 137 GTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAAC 196 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 197 GAAGATTTGCAT 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565221584157600