Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq333 190 3e-43 seq1891 100 4e-16 >seq333 Length=169781 Score = 190 bits (210), Expect = 3e-43 Identities = 812/1276 (64%), Gaps = 23/1276 (2%) Strand=Plus/Minus Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788 ||||| |||||||| ||||| || |||||||| |||||| | |||| | ||||| Sbjct 51066 TTCAATGCTGGTACTCCAAGTCCACAAATGTCTTCGTGTTTCTTGGTTGCTATGAAGGAA 51007 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848 ||||| || |||| ||||||| ||| | | ||||| ||| || ||| | ||| Sbjct 51006 GATTCCATTGATGGTATTTACGACACGTTAAAGACGTGTGCTTTAATTTCCAAGAGTGCT 50947 Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACA 111908 |||||||| ||| | || || ||| || || | |||| ||| |||| ||||| Sbjct 50946 GGTGGTATTGGGTTACATATTCATAATATCCGGGCCACTGGTTCTTATATTGCTGGTACC 50887 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 |||||| || | |||||||| || ||| || | || || ||| ||| || || ||| Sbjct 50886 AATGGTACTTCCAACGGTATTATCCCCATGGTTAGAGTTTTCAACAACACGGCTCGTTAT 50827 Query 111969 GTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || | |||| || || |||| ||| || | || | ||| | || || ||| Sbjct 50826 GTTGATCAAGGTG---GTAACAAGAGACCAGGAGCTTTTGCCCTTTATTTAGAACCTTGG 50770 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 || |||||||| | || ||| |||| | | || ||| | || || | Sbjct 50769 CATGCGGATATTTTTGATTTCATTGATATTAGAAAAAATTCCGGTAAGGAAGAAATTAGA 50710 Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 | ||| | ||| | || | |||||||| ||| | |||||||| ||||||| | Sbjct 50709 GCTAGAGATTTATTCCCGGCGTTATGGATTCCGGATTTATTCATGAAACGAGTTGAACAA 50650 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202 | ||| | ||| || | |||| ||| | | || || ||| | | |||| ||| Sbjct 50649 AATGGAGAATGGACTTTGTTTTCACCAAATGAAGCTCCTGGTTTACCTGATGTTTATGGT 50590 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTG 112262 || || ||||||| | || || || || |||| |||| | ||| || | Sbjct 50589 GATGAATTTGAAGAATTATATGAAAGATATGAAAGAGAAGGTCGTGGTACTAAAACTATC 50530 Query 112263 CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 ||| | | ||| | |||| | | ||||||| || || ||||| |||| | Sbjct 50529 AAGGCTCAAAAATTATGGTATTCTATCTTGGAAGCTCAAACTGAAACAGGTACTCCATTT 50470 Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382 ||| | || || || || |||||| |||| |||||||||||||| || || || || Sbjct 50469 ATGTTATATAAGGATGCTTGTAACAAAAAATCCAATCAAAAGAATTTAGGGGTTATTAAA 50410 Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442 ||| || | ||| ||||| |||||| | | | ||||| || |||||| Sbjct 50409 TCTTCTAATTTATGTTGTGAAATTGTGGAATATTCTGCTCCTGATGAAGTTGCCGTGTGT 50350 Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG---- 112497 || | || || || || | || | ||||| | || || || | ||| Sbjct 50349 AATTTAGCTTCTATTGCCATTCCATCATTCGTGGAAACTGATGAAAATCATTCTTGGTAT 50290 Query 112498 -ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556 ||| ||||||| | || || || || ||| || || || |||| |||||||| Sbjct 50289 AATTTTGAAAAATTACATGAGGTGACTAAAGTAGTTACTCGTAATTTAAATCGAGTTATT 50230 Query 112557 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 112616 ||| | || | ||| || ||| || || || ||||||||| | | || | Sbjct 50229 GATCGTAACTATTATCCAGTTCCTGAAGCCAAGAATTCAAATATGAGAAATAGACCCGTG 50170 Query 112617 GGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 112676 | | |||||||| ||| | || |||| ||| || || | |||||||||| Sbjct 50169 GCCTTGGGTGTCCAGGGTTTAGCTGATGCATTTATGAGTTTAAGATTACCATTTGATTCT 50110 Query 112677 GACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAG 112736 | ||||| |||| | ||| | || || || || || ||||| || ||| |||| Sbjct 50109 CAAGAAGCTCGGGAATTAAATATTCAAATTTTCGAAACCATTTATCATGCTGCTGTTGAA 50050 Query 112737 GC--GAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 112794 | ||| || || || | | || || ||||| ||| | || || || || | Sbjct 50049 TCCTCGGTT--GAATTAGCTCAAGAAGAAGGCGCATATCCAACTTACGAAGGATCACCTG 49992 Query 112795 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA--CGA 112852 |||| ||||| | | ||||||||| | |||||| | | ||| | || | || || Sbjct 49991 CTTCTCAAGGATTATTGCAATTTGATTTATGGGAAAG-AAAACCTA-CTGAATTATGGGA 49934 Query 112853 CTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 112912 ||||| | | ||| || || | | ||| | | ||| | ||| | || Sbjct 49933 TTGGGATAGTTTGAAGCAAAAAATGGCCAAACATGGTTTAAGAAACTCATTATTGGTTGC 49874 Query 112913 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 112972 |||||||| || || || || ||||||||||||||||||||||||| |||||||| || Sbjct 49873 TCCAATGCCTACGGCGTCAACATCACAAATCTTGGGTAATAATGAATGTTTTGAACCATA 49814 Query 112973 CACGACGAACATCTAT 112988 || | ||||| ||| Sbjct 49813 TACTTCCAACATTTAT 49798 >seq1891 Length=76648 Score = 100 bits (110), Expect = 4e-16 Identities = 433/676 (64%), Gaps = 23/676 (3%) Strand=Plus/Minus Query 112593 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT 112652 || |||| || ||| | || |||| | | ||||| |||||||| || ||| | || | Sbjct 36615 TCCAATAAGAAACATAGACCTATTGCTATTGGTGTTCAAGGTCTTGCAGATTTGTT---T 36559 Query 112653 CTTTGTC---GCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTT 112709 ||| | | | |||||||||| |||||| || | | || | |||||| Sbjct 36558 CTTGAACTAAGACTTTCATTTGATTCACCCGAAGCCAAACATTTAAACATTCAAATATTT 36499 Query 112710 GAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCA 112769 || || || || || ||||| ||||| | | || |||||| ||||||||| Sbjct 36498 GAAACTATATACCATGCCGCGATTGAGCAATCTACAGAATTGGCATTTCGTGATGGTCCC 36439 Query 112770 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 112829 |||||| | | ||| |||| ||| || || || || | |||||||||||||||||||| Sbjct 36438 TATGAATCTTATGAAGGTTGTCCTGCATCTCAGGGTATACTTCAATTTGATATGTGGGAT 36379 Query 112830 GGTGAGACCAAGCTTC-----ACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGA 112884 | | ||| |||| | |||| ||||| | | || || |||||| | Sbjct 36378 CAT-AAACC-GTCTTCTTTGTATGACGATTGGGATACCTTAAAACAAAATATCAAGAACT 36321 Query 112885 AGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAAT 112942 || | | | | || || | | ||||| ||||| || || ||||| ||||||| Sbjct 36320 TTGGGTTAAGGA--ATTCCTTACTTGTTGCACCGATGCCCACGGCTTCCACTTCACAAAT 36263 Query 112943 CTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCT 113002 | | || ||||||||| |||||||| || || | ||| | ||| | || || Sbjct 36262 CCTTGGATTTAATGAATGTTTTGAACCATATACTTCTAACTTGTATACCCGTCGAGTACT 36203 Query 113003 CGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCT 113062 | || || ||| | || || || || | | | || | | || | || | Sbjct 36202 TTCTGGGGAATTTCAAGTGGTTAATAAATATTTAATTAAAGATTTAATTGATTTGGGATT 36143 Query 113063 CTGG--TCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATT 113120 ||| | |||| ||||| || || | || ||| || |||||||||||| Sbjct 36142 ATGGAATTCAAG--TATGAGAAATAAAATTATTTTAGAAAATGGATCAATTCAAAATATT 36085 Query 113121 GTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAG 113180 | ||| ||| ||||||||| | || ||| ||||| |||||||| | ||| Sbjct 36084 GCTAGTATCCCACCTGAAATTAAACAATTATACAAGACAGTATGGGAAATAAGTCAAAAG 36025 Query 113181 GATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAAT 113240 | | | ||||| ||||| | || || ||| || ||||||||| ||||||||||| Sbjct 36024 GTTATAATTGATATGGCTTCTGACCGAGGTAAATTTATTGATCAACTGCAAAGTATGAA- 35966 Query 113241 CTATTCATGGAAAGTC 113256 ||||||| |||||| Sbjct 35965 -TATTCATTTAAAGTC 35951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620723932913600