Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq333 165 1e-35
>seq333
Length=169781
Score = 165 bits (182), Expect = 1e-35
Identities = 582/900 (65%), Gaps = 17/900 (2%)
Strand=Plus/Plus
Query 110332 TATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTC 110391
||||||| |||||| ||| || || ||| ||||| || || || ||||| |||||
Sbjct 50378 TATTCCACAATTTCACAACATAAATTAGAAGATTTAATAACCCCTAAATTCTTTTGATTG 50437
Query 110392 GATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGAC 110451
||||| ||| || ||||||||||| | ||| |||| ||||| ||||| || || |
Sbjct 50438 GATTTTTTGTTACAAGCATCCTTATATAACATAAATGGAGTACCTGTTTCAGTTTGAGCT 50497
Query 110452 TTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCC 110511
| | || | | ||||| | || || |||| || | |||||||
Sbjct 50498 TCCAAGATAGAATACCATAATTTTTGAGCCTTGATAGTTTTAGTACCACGACCTTCTCTT 50557
Query 110512 TCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCC 110571
|| || | || || || |||||||| | || || ||||||| | ||| ||
Sbjct 50558 TCATATCTTTCATATAATTCTTCAAATTCATCACCATAAACATCAGGTAAACCAGGAGCT 50617
Query 110572 TTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631
| | || | || | | ||| | |||| | ||||| | |||||||| | ||
Sbjct 50618 TCATTTGGTGAAAACAAAGTCCATTCTCCATTTTGTTCAACTCGTTTCATGAATAAATCC 50677
Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691
|||||||| | ||||| ||| | || | | | ||||| | ||| ||
Sbjct 50678 GGAATCCATAACGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGGAATTTTTT 50737
Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGAT 110751
| | || | || || | ||||||| ||||| ||||| | ||| | || | | |
Sbjct 50738 CTAATATCAATGAAATCAAAAATATCCGCATGCCAAGGTTCTAAATAAAGGGCAAAAGCT 50797
Query 110752 CC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTG 110805
|| ||| || ||| || | |||||| || || ||| ||||| || ||
Sbjct 50798 CCTGGTCTCTTGTTACCACCT---TGATCAACATAACGAGCCGTGTTGTTGAAAACTCTA 50854
Query 110806 AGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCA 110865
| ||| || ||||| || | ||| |||||| ||||| ||| || | ||||
Sbjct 50855 ACCATGGGGATAATACCGTTGGAAGTACCATTGGTACCAGCAATATAAGAACCAGTGGCC 50914
Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TC 110924
|| || | || ||||| | ||||||||||| || | ||| |||| |||||| ||
Sbjct 50915 CGGATATTATGAATATGTAACCCAATACCACCAGCACTCTTGGAAATTAAAGCACACGTC 50974
Query 110925 TGTGA-GTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAG 110983
| | | |||| | |||||||||||||| |||||| |||| | |||| | || || |
Sbjct 50975 TTTAACGTGT--CGTAAATACCATCAATGGAATCTTCCTTCATAGCAACCAAGAAACACG 51032
Query 110984 AAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACA 111043
||||||| || |||| || || || |||||||| | || || | | |||| | ||
Sbjct 51033 AAGACATTTGTGGACTTGGAGTACCAGCATTGAATAACGTGGGGGACCCATGGGTAAAGT 51092
Query 111044 GACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATAC 111103
||| ||||| || |||| || | | | ||| | ||||| ||| |||||||
Sbjct 51093 ATTTTTGAGACATTAAATTATATGATTCAATTACTCGGGGAATATCTTCACCATGAATAC 51152
Query 111104 CAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTT-CCATCAACACGC 111162
|||| ||||||| ||| | | || |||||| |||| | | |||| |||| ||||||
Sbjct 51153 CAATAGCAACTCTCATAAGTAAATGTTGAGGTCTTTC-AGCAACTTTACCATTAACACGT 51211
Query 111163 TGAAGGTAA-CTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221
| ||| |||| || | ||| |||| |||||| || || ||||||||||||
Sbjct 51212 AACAAATAAGATCTT-TCCAAGGTTTTGAAACCAAAATAGTTGTAACTGAAATCACGATC 51270
Score = 91.5 bits (100), Expect = 2e-13
Identities = 370/574 (64%), Gaps = 28/574 (5%)
Strand=Plus/Plus
Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555
||||| || ||| | |||||||| | || || | |||||| ||| | |||
Sbjct 13958 GCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGTTAATCCT 14017
Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615
||||| | |||||||||||||| ||| || || | | ||| |||| |||||| ||
Sbjct 14018 GGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAAGAAAATA 14077
Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGC--AAAAGG--TCGAGACTTGTCGAA 119671
|| || | | || || || | || | ||||| | |||| || | | | |||
Sbjct 14078 CCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTA-TCGGCGAT 14136
Query 119672 CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTC--- 119728
||| || | ||||||||||||||| | || || || | ||| || || || ||
Sbjct 14137 CCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGCATCAAA 14196
Query 119729 GAAAAGTT--GCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAG 119786
|||| || ||||||| | |||||||| ||| |||| || | ||| ||
Sbjct 14197 TAAAAATTCAGCTTCTT-----GAGGATCCTTAACATAAGTATCTATCAAAAGAGAATAA 14251
Query 119787 GTCTCACCATGAACCATTTCATTGTGTGA-CTGATAGGCATAAAATGAGCGAGCTTCGGA 119845
||| ||||| ||||||| | ||| || | |||| |||| |||||| |
Sbjct 14252 ACTTCAGAATGAATCATTTCAAT-CATGATTTGGAAACCATAGAATGCTTTAGCTTCAGG 14310
Query 119846 AATTTGCACTTCGTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCC 119905
|| ||| ||||| || ||||| | | ||||||| ||| || ||||| || |
Sbjct 14311 AACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAGAAGC 14370
Query 119906 AGCGAAGAATGCTAAGATGTACT----TTATGAATTTCTGTTCATTATCGTTGAGT---G 119958
||| ||||| ||||| |||| ||||| | |||||||||| || | |
Sbjct 14371 AGCAAAGAAGGCTAA----TACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTAT 14426
Query 119959 TTTTCCAGTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCT 120018
| ||||| |||| | ||| ||| || || | |||||||| |||||| || |
Sbjct 14427 TGTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTT 14486
Query 120019 GTGCCTTTTTATAGAGTTCCCAAAGTTCAGGATA 120052
|| |||||||| | || ||| | |||| ||||
Sbjct 14487 CAGCTTTTTTATACATTTGCCATATTTCATGATA 14520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588958477964000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |