Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq333 165 1e-35 >seq333 Length=169781 Score = 165 bits (182), Expect = 1e-35 Identities = 582/900 (65%), Gaps = 17/900 (2%) Strand=Plus/Plus Query 110332 TATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTC 110391 ||||||| |||||| ||| || || ||| ||||| || || || ||||| ||||| Sbjct 50378 TATTCCACAATTTCACAACATAAATTAGAAGATTTAATAACCCCTAAATTCTTTTGATTG 50437 Query 110392 GATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGAC 110451 ||||| ||| || ||||||||||| | ||| |||| ||||| ||||| || || | Sbjct 50438 GATTTTTTGTTACAAGCATCCTTATATAACATAAATGGAGTACCTGTTTCAGTTTGAGCT 50497 Query 110452 TTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCC 110511 | | || | | ||||| | || || |||| || | ||||||| Sbjct 50498 TCCAAGATAGAATACCATAATTTTTGAGCCTTGATAGTTTTAGTACCACGACCTTCTCTT 50557 Query 110512 TCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCC 110571 || || | || || || |||||||| | || || ||||||| | ||| || Sbjct 50558 TCATATCTTTCATATAATTCTTCAAATTCATCACCATAAACATCAGGTAAACCAGGAGCT 50617 Query 110572 TTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631 | | || | || | | ||| | |||| | ||||| | |||||||| | || Sbjct 50618 TCATTTGGTGAAAACAAAGTCCATTCTCCATTTTGTTCAACTCGTTTCATGAATAAATCC 50677 Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691 |||||||| | ||||| ||| | || | | | ||||| | ||| || Sbjct 50678 GGAATCCATAACGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGGAATTTTTT 50737 Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGAT 110751 | | || | || || | ||||||| ||||| ||||| | ||| | || | | | Sbjct 50738 CTAATATCAATGAAATCAAAAATATCCGCATGCCAAGGTTCTAAATAAAGGGCAAAAGCT 50797 Query 110752 CC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTG 110805 || ||| || ||| || | |||||| || || ||| ||||| || || Sbjct 50798 CCTGGTCTCTTGTTACCACCT---TGATCAACATAACGAGCCGTGTTGTTGAAAACTCTA 50854 Query 110806 AGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCA 110865 | ||| || ||||| || | ||| |||||| ||||| ||| || | |||| Sbjct 50855 ACCATGGGGATAATACCGTTGGAAGTACCATTGGTACCAGCAATATAAGAACCAGTGGCC 50914 Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TC 110924 || || | || ||||| | ||||||||||| || | ||| |||| |||||| || Sbjct 50915 CGGATATTATGAATATGTAACCCAATACCACCAGCACTCTTGGAAATTAAAGCACACGTC 50974 Query 110925 TGTGA-GTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAG 110983 | | | |||| | |||||||||||||| |||||| |||| | |||| | || || | Sbjct 50975 TTTAACGTGT--CGTAAATACCATCAATGGAATCTTCCTTCATAGCAACCAAGAAACACG 51032 Query 110984 AAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACA 111043 ||||||| || |||| || || || |||||||| | || || | | |||| | || Sbjct 51033 AAGACATTTGTGGACTTGGAGTACCAGCATTGAATAACGTGGGGGACCCATGGGTAAAGT 51092 Query 111044 GACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATAC 111103 ||| ||||| || |||| || | | | ||| | ||||| ||| ||||||| Sbjct 51093 ATTTTTGAGACATTAAATTATATGATTCAATTACTCGGGGAATATCTTCACCATGAATAC 51152 Query 111104 CAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTT-CCATCAACACGC 111162 |||| ||||||| ||| | | || |||||| |||| | | |||| |||| |||||| Sbjct 51153 CAATAGCAACTCTCATAAGTAAATGTTGAGGTCTTTC-AGCAACTTTACCATTAACACGT 51211 Query 111163 TGAAGGTAA-CTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 | ||| |||| || | ||| |||| |||||| || || |||||||||||| Sbjct 51212 AACAAATAAGATCTT-TCCAAGGTTTTGAAACCAAAATAGTTGTAACTGAAATCACGATC 51270 Score = 91.5 bits (100), Expect = 2e-13 Identities = 370/574 (64%), Gaps = 28/574 (5%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 ||||| || ||| | |||||||| | || || | |||||| ||| | ||| Sbjct 13958 GCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGTTAATCCT 14017 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 ||||| | |||||||||||||| ||| || || | | ||| |||| |||||| || Sbjct 14018 GGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAAGAAAATA 14077 Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGC--AAAAGG--TCGAGACTTGTCGAA 119671 || || | | || || || | || | ||||| | |||| || | | | ||| Sbjct 14078 CCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTA-TCGGCGAT 14136 Query 119672 CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTC--- 119728 ||| || | ||||||||||||||| | || || || | ||| || || || || Sbjct 14137 CCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGCATCAAA 14196 Query 119729 GAAAAGTT--GCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAG 119786 |||| || ||||||| | |||||||| ||| |||| || | ||| || Sbjct 14197 TAAAAATTCAGCTTCTT-----GAGGATCCTTAACATAAGTATCTATCAAAAGAGAATAA 14251 Query 119787 GTCTCACCATGAACCATTTCATTGTGTGA-CTGATAGGCATAAAATGAGCGAGCTTCGGA 119845 ||| ||||| ||||||| | ||| || | |||| |||| |||||| | Sbjct 14252 ACTTCAGAATGAATCATTTCAAT-CATGATTTGGAAACCATAGAATGCTTTAGCTTCAGG 14310 Query 119846 AATTTGCACTTCGTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCC 119905 || ||| ||||| || ||||| | | ||||||| ||| || ||||| || | Sbjct 14311 AACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAGAAGC 14370 Query 119906 AGCGAAGAATGCTAAGATGTACT----TTATGAATTTCTGTTCATTATCGTTGAGT---G 119958 ||| ||||| ||||| |||| ||||| | |||||||||| || | | Sbjct 14371 AGCAAAGAAGGCTAA----TACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTAT 14426 Query 119959 TTTTCCAGTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCT 120018 | ||||| |||| | ||| ||| || || | |||||||| |||||| || | Sbjct 14427 TGTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTT 14486 Query 120019 GTGCCTTTTTATAGAGTTCCCAAAGTTCAGGATA 120052 || |||||||| | || ||| | |||| |||| Sbjct 14487 CAGCTTTTTTATACATTTGCCATATTTCATGATA 14520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588958477964000