Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq333 185 1e-41 seq2235 109 6e-19 >seq333 Length=169781 Score = 185 bits (204), Expect = 1e-41 Identities = 819/1282 (64%), Gaps = 35/1282 (3%) Strand=Plus/Plus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 ||| ||||| | || || |||||||| ||||||||||||||||||||||||| || || Sbjct 49798 ATAAATGTTGGAAGTATATGGTTCAAAACATTCATTATTACCCAAGATTTGTGATGTTGA 49857 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTC 106053 || || |||||||| || | ||| | ||| | | ||| | || || || Sbjct 49858 CGCCGTAGGCATTGGAGCAACCAATAATGAGTTTCTTAAACCATGTTTGGCCATTTTTTG 49917 Query 106054 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGA 106111 ||| | | |||||| | | || || || | ||||| | |||||| | ||||||||| Sbjct 49918 CTTCAAACTATCCCAATCCCATAATTCAG-TAGGTTT-TCTTTCCCATAAATCAAATTGC 49975 Query 106112 AGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCC 106171 | | ||||| || | || || || || | || ||| | |||| ||| ||| Sbjct 49976 AATAATCCTTGAGAAGCAGGTGATCCTTCGTAAGTTGGATATGCGCCTTCTTCTTGAGCT 50035 Query 106172 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 106231 |||||| | || | | || ||||| |||||||| || || || ||| | Sbjct 50036 AATTCAACCGAGGATTCAACAGCAGCATGATAAATGGTTTCGAAAATTTGAATATTTAAT 50095 Query 106232 TCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA---ATAAATACATCCGCGAGA 106288 ||| ||||| | |||||||||| ||| | ||| |||||| |||| || | | Sbjct 50096 TCCCGAGCTTCTTGAGAATCAAATG-GTA--ATCTTAAACTCATAAATGCATCAGCTAAA 50152 Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACT--TTCGC-GCAGTCTCA 106345 || || |||||||| | | ||||| | || |||||| || | || || ||| | Sbjct 50153 CCCTGGACACCCAAGGCCACGGGTCTATTTCTCATATTTGAATTCTTGGCTTCAG---GA 50209 Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405 || |||||| | || | ||||| ||||| |||| ||| ||||| | || || | Sbjct 50210 ACTGGATAATAGTTACGATCAATAACTCGATTTAAATTACGAGTAACTACTTTAGTCACC 50269 Query 106406 TCATGAAGTTTTTCATAATCA---AAAGTGCGAGTCTCTTCA---TTGACATACTTTGGA 106459 ||||| | ||||||| ||| | ||| || | || ||| | || | |||| Sbjct 50270 TCATGTAATTTTTCAAAATTATACCAAGAATGATTTTCATCAGTTTCCACGAATGATGGA 50329 Query 106460 AGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATT 106519 | ||| || || || ||||| || || || ||||| | | | || || | |||| Sbjct 50330 ATGGCAATAGAAGCTAAATTACACACGGCAACTTCATCAGGAGCAGAATATTCCACAATT 50389 Query 106520 TCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTG 106579 || ||| || || ||| ||||| ||| ||||||||||| || |||||||| Sbjct 50390 TCACAACATAAATTAGAAGATTTAATAACCCCTAAATTCTTTTGATTGGATTTTTTGTTA 50449 Query 106580 CACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCC 106639 || |||||||| || | ||| | || || || || || || || | | | || | Sbjct 50450 CAAGCATCCTTATATAACATAAATGGAGTACCTGTTTCAGTTTGAGCTTCCAAGATAGAA 50509 Query 106640 TTCCA-CACATCGGCGGCTGGTACAATGGCGTTGG---CCCGTCCCTCCGCCTCGTACTT 106695 | ||| | | | | || | || | || | | || || || || || | Sbjct 50510 TACCATAATTTTTGAGCCTTG----ATAGTTTTAGTACCACGACCTTCTCTTTCATATCT 50565 Query 106696 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 106755 | || | ||||||| || ||||| | || | | ||| || || | | ||| Sbjct 50566 TTCATATAATTCTTCAAATTCATCACCATAAACATCAGGTAAACCAGGAGCTTCATTTGG 50625 Query 106756 ACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 106815 | || | || ||||| ||| | ||||| || |||||||| | || |||||||| Sbjct 50626 TGAAAACAAAGTCCATTCTCCATTTTGTTCAACTCGTTTCATGAATAAATCCGGAATCCA 50685 Query 106816 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 106875 | | | || | ||||||| | | ||||| | ||| || || | || Sbjct 50686 TAACGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGGAATTTTTTCTAATATC 50745 Query 106876 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CT 106931 || ||| || | |||||||| ||||| || || | ||| | || | || ||| || Sbjct 50746 AATGAAATCAAAAATATCCGCATGCCAAGGTTCTAAATAAAGGGCAAAAGCTCCTGGTCT 50805 Query 106932 TTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAA 106991 | | ||| |||||| ||||| || || ||| ||| || || | || ||| || | Sbjct 50806 CTTG-TTACCACCTTGATCAACATAACGAGCCGTGTTGTTGAAAACTCTAACCATGGGGA 50864 Query 106992 TAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCAT 107051 ||||||| | || |||||| || || |||| ||| | |||| | | || || Sbjct 50865 TAATACCGTTGGAAGTACCATTGGTACCAGCAATATAAGAACCAGTGGCCCGGATATTAT 50924 Query 107052 GGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTC 107111 | || || | ||||||||| ||||| | ||| || ||| |||||| | | | || Sbjct 50925 GAATATGTAACCCAATACCACCAGCACTCTTGGAAATTAAAGCACACGTCTTTAACGTGT 50984 Query 107112 CATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCG 107171 | || ||||| | || || || ||||| | || | | ||| || ||||| || | Sbjct 50985 CGTAAATACCATCAATGGAATCTTCCTTCATAGCAACCAAGAAACACGAAGACATTTGTG 51044 Query 107172 GTCTTGGTGTACCAGCATTGAA 107193 | ||||| |||||||||||||| Sbjct 51045 GACTTGGAGTACCAGCATTGAA 51066 >seq2235 Length=55310 Score = 109 bits (120), Expect = 6e-19 Identities = 272/408 (67%), Gaps = 5/408 (1%) Strand=Plus/Plus Query 9192 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9251 |||||||| | ||||| | | || || ||| | |||||| | ||||| ||| || Sbjct 20079 CGATCAAATCTTCCTGGTCTTAAAAGTGCTCGATCTAAAATATCAGCACGATTAGTCCCG 20138 Query 9252 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9311 || | ||||||| | | | |||||||||||||||| || | | ||| || Sbjct 20139 GCCAATACAACAACATGATCTGAACTATCAAAACCATCCATTTCAACAAGCAATTGATTC 20198 Query 9312 ATAGTTTGTTCCCGTTCATC--ATTCGCTGGC-ATACCACCAGCACTGCGTTGCTTTCCC 9368 | ||| ||| |||||||| || | | | | || ||| | | | || || Sbjct 20199 AAAGTGGTTTCACGTTCATCTGATCCACCCGAGAAACTACCTTTGCCTCTCAGTTTACCA 20258 Query 9369 ACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAG 9428 | |||||||| ||||||| || |||||| |||| |||||| ||||| | | || Sbjct 20259 ATAGCATCAATTTCATCAACAAATACAATAGATGGCGCATTTTCTCGGGCAGTCTTGAAT 20318 Query 9429 AGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAA 9488 | ||| ||||| || |||| || || |||||||||||||| ||||| | | | ||| Sbjct 20319 AAATCACGAACTCTACTGGCACCTACCCCAACAAACATCTCAACAAATTCAGAACCAGAA 20378 Query 9489 CATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9547 | | || || || || || |||||| ||| |||| |||| |||||| ||||| Sbjct 20379 -ACAGAATAAAATGGTACCCCAGCTTCACCTGCAGTGGCCTTCGCGATAAGAGTTTTACC 20437 Query 9548 CGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 ||||| || ||||| ||| | || || || ||||| || || || Sbjct 20438 AGTACCGGGAGGACCCGAGAGAATAGCCCCACGAGGAATTTTTGCCCC 20485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589963248071200