Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq899 116 4e-21
>seq899
Length=17586
Score = 116 bits (128), Expect = 4e-21
Identities = 252/372 (68%), Gaps = 5/372 (1%)
Strand=Plus/Plus
Query 154710 AGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATG 154769
|||||| | ||| | || |||| ||||| |||||||| |||||||| |||| ||||
Sbjct 14400 AGAAATATTTGTCTTATTCCAGTTTCAGCTCATGGAACCAATCCTGCCTCGGCTGCCATG 14459
Query 154770 GCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGAT 154829
|| |||||||||| || || ||| || |||||| || || | | |||
Sbjct 14460 TGTGGATTGAAAGTTGTCCCCGTGAAATGTTTAGACGATGGTTCTATTGATTTGATCGAT 14519
Query 154830 CTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCA 154889
|| | | || || | || | | | || | | ||||||||||| || ||
Sbjct 14520 TTACAAGAAAAGGCCGTACAACATGCCGCTAATCTTTGTTCGATTATGATTACTTATCCT 14579
Query 154890 TCTACACATGGTGTATTTGAAACTAACATTAGAC-AGATATGTAAGATCGTTCATGACAA 154948
|| ||| ||||| | || ||| || |||| || || || | | || |||||| | ||
Sbjct 14580 TCAACATATGGTCTTTTCGAACCTGGTATTAAACAAGCCAT-TGAAATTGTTCATAAGAA 14638
Query 154949 TGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACC 155008
|||||| || ||| | ||||| || ||| | |||||||| || || || || ||
Sbjct 14639 TGGTGGGTTAGTTTATTTGGATGGGGCTAATATGAATGCACAAGTTGGTCTTACATCTCC 14698
Query 155009 ATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATT--CTGTATTCCA 155066
| | || | ||||| |||||||||||| |||| | ||||||||||| || ||| ||
Sbjct 14699 AGGAGATTTGGGTGCTGATGTATGTCATTTAAATATTCATAAAACATTTGCTTTATCTCA 14758
Query 155067 C-ATGGAGGTGG 155077
| |||||||||
Sbjct 14759 CGGTGGAGGTGG 14770
Score = 82.4 bits (90), Expect = 9e-11
Identities = 110/153 (72%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 153276 TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTA 153335
||||| || || || ||||| || ||| | || ||| |||| || ||||| ||| ||||
Sbjct 12930 TGGTATACTTCATATACTCCTTACCAACCAGAAATAGCTCAAGGTAGATTAGAATCTTTG 12989
Query 153336 TTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTA 153395
|| |||| |||||| | | | | || ||||||||||| || || || || ||
Sbjct 12990 TTAAATTTCCAAACTATGGTTTCTTCCTTGACTGGATTACCAATGGCTAATGCTTCCCTT 13049
Query 153396 TTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428
|||||||||| || || || || ||||| |||
Sbjct 13050 TTAGATGAAGGTACCGCTGCTGCTGAAGCTATG 13082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579195568419200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |