Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq1221 118 1e-21 >seq1221 Length=135038 Score = 118 bits (130), Expect = 1e-21 Identities = 174/243 (72%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 104840 AAAATAGTTTACGCCAA---TATTCTTAAAGAATTATTATGGGTGATGAAAGGTTTAACA 104896 |||| ||||| | |||| ||| || | ||| | |||||| | | |||| || Sbjct 40483 AAAAGAGTTTTCTCCAAGGGTATAATTCATGAACTTTTATGGTTTGTTTCTGGTTCCACT 40542 Query 104897 AATTCTAACTTGTTAAATGAAATTGGTGTTAAAGTATGGAATGATAATGGTTCACGTAAG 104956 || |||| | |||| ||| | ||||||||| | ||| | | || ||||||||| | Sbjct 40543 GATGCTAAACTATTAAGTGACAAGGGTGTTAAAATCTGGGAGGGGAACGGTTCACGTGAA 40602 Query 104957 TTTTTAGATTCTTGTGGATTTCACTT-TCGAAAAGAAGGTGATTTAGGACCAATTTATGG 105015 ||||| ||| | ||||| ||| ||| |||||||||||||||||| ||||||| Sbjct 40603 TTTTTGGATAAATTGGGATTA-ACTCATCGTCGTGAAGGTGATTTAGGACCAGTTTATGG 40661 Query 105016 ATTTCAATGGAGACATGCTGGAGCTCAATATATCGACTGTGATACCGACTATACCGGCCA 105075 ||| |||||||||||| ||||| ||||| | || ||||||| |||||||| || || Sbjct 40662 ATTCCAATGGAGACATTTCGGAGCCGAATATCTAGATTGTGATAGTGACTATACTGGTCA 40721 Query 105076 AGG 105078 || Sbjct 40722 GGG 40724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658383612504800